From noreply at github.com Tue Nov 6 20:00:10 2012 From: noreply at github.com (GitHub) Date: Tue, 06 Nov 2012 17:00:10 -0800 Subject: [Numpy-svn] [numpy/numpy] 237e81: BUG: Reshape of 0-sized arrays failed to work with... Message-ID: <5099b29af2621_7d9718a6af058617@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 237e816e203a2a5a190e23e28d945e0f089663ed https://github.com/numpy/numpy/commit/237e816e203a2a5a190e23e28d945e0f089663ed Author: Sebastian Berg Date: 2012-11-01 (Thu, 01 Nov 2012) Changed paths: M numpy/core/src/multiarray/shape.c M numpy/core/tests/test_regression.py Log Message: ----------- BUG: Reshape of 0-sized arrays failed to work without copy This also adds a check for order=Keeporder which is not supported. "closes Issue #2700" Commit: 0d275f114e49ef5f9569832be2743aa85c4bb4e1 https://github.com/numpy/numpy/commit/0d275f114e49ef5f9569832be2743aa85c4bb4e1 Author: Sebastian Berg Date: 2012-11-01 (Thu, 01 Nov 2012) Changed paths: M numpy/core/src/multiarray/shape.c Log Message: ----------- MNT: Remove _check_zeros from NewShape _attempt_nocopy_reshape already handles this case fine. The only purpose would be to slightly speed up this special case. Commit: 93be7c0ca93735faac3c9b03b6844a4f9ed90d71 https://github.com/numpy/numpy/commit/93be7c0ca93735faac3c9b03b6844a4f9ed90d71 Author: Stefan van der Walt Date: 2012-11-06 (Tue, 06 Nov 2012) Changed paths: M numpy/core/src/multiarray/shape.c M numpy/core/tests/test_regression.py Log Message: ----------- Merge pull request #2702 from seberg/issue2700 BUG: Reshape of 0-sized arrays failed to work without copy. Compare: https://github.com/numpy/numpy/compare/526b7647ad3e...93be7c0ca937 From noreply at github.com Tue Nov 6 21:07:22 2012 From: noreply at github.com (GitHub) Date: Tue, 06 Nov 2012 18:07:22 -0800 Subject: [Numpy-svn] [numpy/numpy] cf0f98: BUG: Remove pointer cast from the PyArray_BYTES ma... Message-ID: <5099c25ae1c6a_7d961c72ae4339a2@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: cf0f98595cf2e0c69b5432d54bd6ceef57540c67 https://github.com/numpy/numpy/commit/cf0f98595cf2e0c69b5432d54bd6ceef57540c67 Author: Frederic Date: 2012-11-06 (Tue, 06 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- BUG: Remove pointer cast from the PyArray_BYTES macro. This fixes a compilation problem encountered with numpy 1.7 when the PyArray_BYTES macro was used as an lvalue in Theano. The macro worked as an lvalue in 1.6 and in 1.7 only the struct name was changed, which makes the problem a bit of a mystery, but Theano compiles with this fix. Commit: e614443709ab49e4a5f2533b038e650f564d3d07 https://github.com/numpy/numpy/commit/e614443709ab49e4a5f2533b038e650f564d3d07 Author: Charles Harris Date: 2012-11-06 (Tue, 06 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- BUG: Remove pointer cast from the PyArray_DATA macro. This lets PyArray_DATA be used as an lvalue as some compilers raised an error with the previous version. The type is now determined by the type of the struct member and is char*. PyArray_BYTES had the same problem when used as an lvalue in Theano and the same fix is used here. This problem needs a bigger fix at some point as the function equivalent of the macro does not return an lvalue. Commit: 82c0bb8a964c10b4c37665c5f2f6885fa46cd6a1 https://github.com/numpy/numpy/commit/82c0bb8a964c10b4c37665c5f2f6885fa46cd6a1 Author: Charles Harris Date: 2012-11-06 (Tue, 06 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- Fixes that let PyArray_DATA and PyArray_BYTES be used as lvalues. * pull-2709: BUG: Remove pointer cast from the PyArray_DATA macro. BUG: Remove pointer cast from the PyArray_BYTES macro. Compare: https://github.com/numpy/numpy/compare/93be7c0ca937...82c0bb8a964c From noreply at github.com Fri Nov 9 02:49:15 2012 From: noreply at github.com (GitHub) Date: Thu, 08 Nov 2012 23:49:15 -0800 Subject: [Numpy-svn] [numpy/numpy] 6c948c: Fix typos. Message-ID: <509cb57b987e5_4546facae4353df@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 6c948c5bca99c4a030e67fcc5bb2c0b9d8c72658 https://github.com/numpy/numpy/commit/6c948c5bca99c4a030e67fcc5bb2c0b9d8c72658 Author: Christian Brueffer Date: 2012-11-08 (Thu, 08 Nov 2012) Changed paths: M INSTALL.txt Log Message: ----------- Fix typos. Commit: 5cddd6d89c6e2282834ab1cc12efafd91ae6e08a https://github.com/numpy/numpy/commit/5cddd6d89c6e2282834ab1cc12efafd91ae6e08a Author: Charles Harris Date: 2012-11-08 (Thu, 08 Nov 2012) Changed paths: M INSTALL.txt Log Message: ----------- Merge pull request #2717 from cbrueffer/cleanup Looks good to me. Thanks Compare: https://github.com/numpy/numpy/compare/82c0bb8a964c...5cddd6d89c6e From noreply at github.com Fri Nov 9 03:03:07 2012 From: noreply at github.com (GitHub) Date: Fri, 09 Nov 2012 00:03:07 -0800 Subject: [Numpy-svn] [numpy/numpy] dc2e3b: Correct `linalg.solve` doc string Message-ID: <509cb8bb56081_9b410a1ae4231ec@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: dc2e3b7cace2d82702f163d39cb83adfab99ea3e https://github.com/numpy/numpy/commit/dc2e3b7cace2d82702f163d39cb83adfab99ea3e Author: Guillaume Gay Date: 2012-10-22 (Mon, 22 Oct 2012) Changed paths: M numpy/linalg/linalg.py Log Message: ----------- Correct `linalg.solve` doc string Fixes issue 2692 Commit: f88e07af35f35340ad6c0df10946aead4d2fdd51 https://github.com/numpy/numpy/commit/f88e07af35f35340ad6c0df10946aead4d2fdd51 Author: Guillaume Gay Date: 2012-10-22 (Mon, 22 Oct 2012) Changed paths: M numpy/linalg/linalg.py Log Message: ----------- Taking njsmith comment into account Commit: 25f536362d0417269a474ebee5815fe615bf5872 https://github.com/numpy/numpy/commit/25f536362d0417269a474ebee5815fe615bf5872 Author: Guillaume Gay Date: 2012-10-22 (Mon, 22 Oct 2012) Changed paths: M numpy/linalg/linalg.py Log Message: ----------- Fixed parenthesis typo Commit: 75b8119f8145ab08a436ecfd7de868c6c6ba8f6d https://github.com/numpy/numpy/commit/75b8119f8145ab08a436ecfd7de868c6c6ba8f6d Author: Charles Harris Date: 2012-11-09 (Fri, 09 Nov 2012) Changed paths: M numpy/linalg/linalg.py Log Message: ----------- Merge pull request #2693 from glyg/master DOC: more reproducible example in linalg.solve docstring Compare: https://github.com/numpy/numpy/compare/5cddd6d89c6e...75b8119f8145 From noreply at github.com Sun Nov 11 18:29:58 2012 From: noreply at github.com (GitHub) Date: Sun, 11 Nov 2012 15:29:58 -0800 Subject: [Numpy-svn] [numpy/numpy] bee8c4: BUG: fix Python 2.4 build with NPY_SEPARATE_COMPIL... Message-ID: <50a034f622aae_3187df2af07682f@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: bee8c4d2474bbd21acfbd4d7e8c71cf12b3d6227 https://github.com/numpy/numpy/commit/bee8c4d2474bbd21acfbd4d7e8c71cf12b3d6227 Author: Pauli Virtanen Date: 2012-11-11 (Sun, 11 Nov 2012) Changed paths: M numpy/core/src/umath/reduction.c Log Message: ----------- BUG: fix Python 2.4 build with NPY_SEPARATE_COMPILATION Commit: c479200918f034f587d24ba59c0550d2241ddf9a https://github.com/numpy/numpy/commit/c479200918f034f587d24ba59c0550d2241ddf9a Author: Charles Harris Date: 2012-11-11 (Sun, 11 Nov 2012) Changed paths: M numpy/core/src/umath/reduction.c Log Message: ----------- Merge pull request #2723 from pv/py24-fix BUG: fix Python 2.4 build with NPY_SEPARATE_COMPILATION Compare: https://github.com/numpy/numpy/compare/75b8119f8145...c479200918f0 From noreply at github.com Sun Nov 11 18:57:24 2012 From: noreply at github.com (GitHub) Date: Sun, 11 Nov 2012 15:57:24 -0800 Subject: [Numpy-svn] [numpy/numpy] 39e10f: BUG: fix Python 2.4 build with NPY_SEPARATE_COMPIL... Message-ID: <50a03b64b9ce4_4101157baec9082a@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 39e10f5355f0e91ce4f410d0a2d2d2dc3d4a5482 https://github.com/numpy/numpy/commit/39e10f5355f0e91ce4f410d0a2d2d2dc3d4a5482 Author: Pauli Virtanen Date: 2012-11-11 (Sun, 11 Nov 2012) Changed paths: M numpy/core/src/umath/reduction.c Log Message: ----------- BUG: fix Python 2.4 build with NPY_SEPARATE_COMPILATION From noreply at github.com Mon Nov 12 03:21:57 2012 From: noreply at github.com (GitHub) Date: Mon, 12 Nov 2012 00:21:57 -0800 Subject: [Numpy-svn] [numpy/numpy] 7c9061: BUG: Update aligned flag when setting strides attr... Message-ID: <50a0b1a5d5ade_63a811caaec594f7@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 7c90615c9a34c688e7b77986df7b3250501053f3 https://github.com/numpy/numpy/commit/7c90615c9a34c688e7b77986df7b3250501053f3 Author: Sebastian Berg Date: 2012-11-09 (Fri, 09 Nov 2012) Changed paths: M numpy/core/src/multiarray/getset.c M numpy/core/tests/test_regression.py Log Message: ----------- BUG: Update aligned flag when setting strides attribute. Commit: cb41689b6150b0d325755b469fba975ce105361f https://github.com/numpy/numpy/commit/cb41689b6150b0d325755b469fba975ce105361f Author: njsmith Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/core/src/multiarray/getset.c M numpy/core/tests/test_regression.py Log Message: ----------- Merge pull request #2722 from seberg/stride_set BUG: Update aligned flag when setting strides attribute. Compare: https://github.com/numpy/numpy/compare/c479200918f0...cb41689b6150 From noreply at github.com Mon Nov 12 04:36:47 2012 From: noreply at github.com (GitHub) Date: Mon, 12 Nov 2012 01:36:47 -0800 Subject: [Numpy-svn] [numpy/numpy] 6d1288: BUG: Avoid regression in np.insert for axis!=0 or ... Message-ID: <50a0c32f59669_718a1016ae85993@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 6d1288ee58a3b4ff2986fb4990515486abcabb60 https://github.com/numpy/numpy/commit/6d1288ee58a3b4ff2986fb4990515486abcabb60 Author: Sebastian Berg Date: 2012-10-23 (Tue, 23 Oct 2012) Changed paths: M numpy/lib/function_base.py M numpy/lib/tests/test_function_base.py Log Message: ----------- BUG: Avoid regression in np.insert for axis!=0 or None This avoids a regression with insert failing where it worked before when inserting a full array with a scalar and axis!=0. See also Issue #378 and #452. Commit: 26d15651fa5a27af69028cebc04c97e797280a48 https://github.com/numpy/numpy/commit/26d15651fa5a27af69028cebc04c97e797280a48 Author: njsmith Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/lib/function_base.py M numpy/lib/tests/test_function_base.py Log Message: ----------- Merge pull request #2697 from seberg/reginsert BUG: Avoid regression in np.insert for axis!=0 or None Compare: https://github.com/numpy/numpy/compare/39e10f5355f0...26d15651fa5a From noreply at github.com Tue Nov 13 00:57:41 2012 From: noreply at github.com (GitHub) Date: Mon, 12 Nov 2012 21:57:41 -0800 Subject: [Numpy-svn] [numpy/numpy] ea0377: ENH: Remove the need for temporary copies in numpy... Message-ID: <50a1e155c1155_2d6b12feae49138f@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: ea037770e03f23aca1a06274a1a8e8bf0e0e2ee4 https://github.com/numpy/numpy/commit/ea037770e03f23aca1a06274a1a8e8bf0e0e2ee4 Author: Nicolas Scheffer Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/core/blasdot/_dotblas.c M numpy/core/tests/test_blasdot.py Log Message: ----------- ENH: Remove the need for temporary copies in numpy.dot in numpy core, modified the blas function call to handle C and F order arrays without the need for copy. This brings a significant speed up for matrix multiplication Added a full test for matrix multiplication in test_blasdot Commit: e31eb4bb807dc58f112abdf79056806cafac7f9c https://github.com/numpy/numpy/commit/e31eb4bb807dc58f112abdf79056806cafac7f9c Author: Nicolas Scheffer Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/core/blasdot/_dotblas.c Log Message: ----------- Removed trailing printf statement Commit: 780c1a6bb6d18bc21fed7fa251faffb9ea51e861 https://github.com/numpy/numpy/commit/780c1a6bb6d18bc21fed7fa251faffb9ea51e861 Author: Charles Harris Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/core/blasdot/_dotblas.c M numpy/core/tests/test_blasdot.py Log Message: ----------- Merge pull request #2730 from leschef/faster_dot ENH: Remove the need for temporary copies in numpy.dot Compare: https://github.com/numpy/numpy/compare/cb41689b6150...780c1a6bb6d1 From noreply at github.com Tue Nov 13 19:53:34 2012 From: noreply at github.com (GitHub) Date: Tue, 13 Nov 2012 16:53:34 -0800 Subject: [Numpy-svn] [numpy/numpy] 2654ed: FIX: Python 3.2 debug assertion Message-ID: <50a2eb8e6ddb5_70addc3ae8105540@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 2654edef63b09c07e3c960a7424da1fd8eb75c20 https://github.com/numpy/numpy/commit/2654edef63b09c07e3c960a7424da1fd8eb75c20 Author: Ond?ej ?ert?k Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/common.c Log Message: ----------- FIX: Python 3.2 debug assertion Fixes gh-646, gh-2731. The patch was originally attached to gh-646 by "skrah". Commit: ddb71564755d2ce803f7bd00614ae160e1a618b9 https://github.com/numpy/numpy/commit/ddb71564755d2ce803f7bd00614ae160e1a618b9 Author: Ond?ej ?ert?k Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/common.c Log Message: ----------- Merge pull request #2734 from certik/fix2731 FIX: Python 3.2 debug assertion Compare: https://github.com/numpy/numpy/compare/780c1a6bb6d1...ddb71564755d From noreply at github.com Tue Nov 13 19:54:46 2012 From: noreply at github.com (GitHub) Date: Tue, 13 Nov 2012 16:54:46 -0800 Subject: [Numpy-svn] [numpy/numpy] 5ae12e: FIX: Python 3.2 debug assertion Message-ID: <50a2ebd6997d7_7fe91978af0592fb@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 5ae12eacb81c9c160b2977ad46d668f5a1c37229 https://github.com/numpy/numpy/commit/5ae12eacb81c9c160b2977ad46d668f5a1c37229 Author: Ond?ej ?ert?k Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/common.c Log Message: ----------- FIX: Python 3.2 debug assertion Fixes gh-646, gh-2731. The patch was originally attached to gh-646 by "skrah". From noreply at github.com Tue Nov 13 20:56:36 2012 From: noreply at github.com (GitHub) Date: Tue, 13 Nov 2012 17:56:36 -0800 Subject: [Numpy-svn] [numpy/numpy] 88124a: BUG: Update base-traversal algorithm for array sub... Message-ID: <50a2fa54b3309_ada13dfae4106442@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 88124ae879e4f900311ef254529ba36378b34da8 https://github.com/numpy/numpy/commit/88124ae879e4f900311ef254529ba36378b34da8 Author: Travis E. Oliphant Date: 2012-11-05 (Mon, 05 Nov 2012) Changed paths: M numpy/core/src/multiarray/arrayobject.c M numpy/core/tests/test_memmap.py Log Message: ----------- BUG: Update base-traversal algorithm for array sub-classes so as to stop the base-traversal when the new base would not be an instance of the sub-class. Commit: 40d02916e9cf846dde88ccb7fc2b7f9ebd0d0308 https://github.com/numpy/numpy/commit/40d02916e9cf846dde88ccb7fc2b7f9ebd0d0308 Author: Ond?ej ?ert?k Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/arrayobject.c M numpy/core/tests/test_memmap.py Log Message: ----------- Merge pull request #2708 from ContinuumIO/base_traversal Update base-traversal algorithm to stop at sub-class boundary Compare: https://github.com/numpy/numpy/compare/ddb71564755d...40d02916e9cf From noreply at github.com Tue Nov 13 21:04:33 2012 From: noreply at github.com (GitHub) Date: Tue, 13 Nov 2012 18:04:33 -0800 Subject: [Numpy-svn] [numpy/numpy] a9c7b3: BUG: Update base-traversal algorithm for array sub... Message-ID: <50a2fc311eebb_3d9e18f0aec750da@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: a9c7b38f293eee7ab752e5828917ef83a8c5ee47 https://github.com/numpy/numpy/commit/a9c7b38f293eee7ab752e5828917ef83a8c5ee47 Author: Travis E. Oliphant Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/arrayobject.c M numpy/core/tests/test_memmap.py Log Message: ----------- BUG: Update base-traversal algorithm for array sub-classes so as to stop the base-traversal when the new base would not be an instance of the sub-class. From noreply at github.com Wed Nov 14 14:54:05 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 11:54:05 -0800 Subject: [Numpy-svn] [numpy/numpy] 48beeb: TST: mark longdouble tests for spacing/nextafter a... Message-ID: <50a3f6ddb3618_439815bcaec65314@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.6.x Home: https://github.com/numpy/numpy Commit: 48beebc70360a447c7ba8155f20ff170c300dfc6 https://github.com/numpy/numpy/commit/48beebc70360a447c7ba8155f20ff170c300dfc6 Author: rgommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/tests/test_umath.py Log Message: ----------- TST: mark longdouble tests for spacing/nextafter as knownfail on PPC. See #1664. Thanks to Matthew Brett for suggesting this improved detection of PPC. Conflicts: numpy/core/tests/test_umath.py Commit: 023e559eda106cc48f82408a5958c7444d3769b2 https://github.com/numpy/numpy/commit/023e559eda106cc48f82408a5958c7444d3769b2 Author: Ralf Gommers Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M numpy/core/tests/test_umath.py Log Message: ----------- Merge pull request #2739 from certik/fix346 TST: mark longdouble tests for spacing/nextafter as knownfail on PPC. Compare: https://github.com/numpy/numpy/compare/23348280208f...023e559eda10 From noreply at github.com Wed Nov 14 15:06:44 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 12:06:44 -0800 Subject: [Numpy-svn] [numpy/numpy] f6cab0: FIX: Mark a tests knownfail on Hurd Message-ID: <50a3f9d480738_217114cbae854767@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: f6cab0a8afc16137e8e0edb3e657494d37d8d211 https://github.com/numpy/numpy/commit/f6cab0a8afc16137e8e0edb3e657494d37d8d211 Author: Ond?ej ?ert?k Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/tests/test_memmap.py Log Message: ----------- FIX: Mark a tests knownfail on Hurd Fixes gh-415. This test raises "Function not implemented" on Hurd: ====================================================================== ERROR: test_flush (test_memmap.TestMemmap) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/buildd-python-numpy_1.7.0~b2-1-hurd-i386-Ws9GSv/python-numpy-1.7.0~b2/debian/tmp/usr/lib/python3/dist-packages/numpy/core/tests/test_memmap.py", line 72, in test_flush fp.flush() File "/build/buildd-python-numpy_1.7.0~b2-1-hurd-i386-Ws9GSv/python-numpy-1.7.0~b2/debian/tmp/usr/lib/python3/dist-packages/numpy/core/memmap.py", line 301, in flush self.base.flush() mmap.error: [Errno 1073741902] Function not implemented Which seems like a Hurd issue: http://web.archiveorange.com/archive/v/dpz3Spjqy0ESHmXKVt7c http://lists.gnu.org/archive/html/bug-hurd/2002-11/msg00243.html So we mark it as knownfail on that platform. Commit: 9f1ee24ec0801e3980c904dd1bf27e752ee8c1dc https://github.com/numpy/numpy/commit/9f1ee24ec0801e3980c904dd1bf27e752ee8c1dc Author: Ralf Gommers Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M numpy/core/tests/test_memmap.py Log Message: ----------- Merge pull request #2736 from certik/fix415 FIX: Mark a tests knownfail on Hurd Compare: https://github.com/numpy/numpy/compare/40d02916e9cf...9f1ee24ec080 From noreply at github.com Wed Nov 14 15:28:17 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 12:28:17 -0800 Subject: [Numpy-svn] [numpy/numpy] 58c1bf: BUG: fix download link in setup.py (which is shown... Message-ID: <50a3fee1b40ae_7533dc9aec114854@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 58c1bf7f6171e774197784787e98125ae2f6f349 https://github.com/numpy/numpy/commit/58c1bf7f6171e774197784787e98125ae2f6f349 Author: Ralf Gommers Date: 2012-11-05 (Mon, 05 Nov 2012) Changed paths: M setup.py Log Message: ----------- BUG: fix download link in setup.py (which is shown on PyPi). Closes Trac ticket 2243. Commit: 067b5f860d290c321cb5ed791db7f19960afb00f https://github.com/numpy/numpy/commit/067b5f860d290c321cb5ed791db7f19960afb00f Author: Ralf Gommers Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M setup.py Log Message: ----------- Merge pull request #2707 from rgommers/ticket-2243-downloadlink BUG: fix download link in setup.py (which is shown on PyPi). Compare: https://github.com/numpy/numpy/compare/9f1ee24ec080...067b5f860d29 From noreply at github.com Wed Nov 14 15:32:18 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 12:32:18 -0800 Subject: [Numpy-svn] [numpy/numpy] 98ca13: BUG: fix download link in setup.py (which is shown... Message-ID: <50a3ffd292322_26b413ebaec314e1@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 98ca13d01c67f3248671f418d0fe88a566462f9d https://github.com/numpy/numpy/commit/98ca13d01c67f3248671f418d0fe88a566462f9d Author: Ralf Gommers Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M setup.py Log Message: ----------- BUG: fix download link in setup.py (which is shown on PyPi). Closes Trac ticket 2243. From noreply at github.com Wed Nov 14 17:55:29 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 14:55:29 -0800 Subject: [Numpy-svn] [numpy/numpy] ddbb4b: PKG: Fix minor typo in setup.py. Message-ID: <50a4216150919_1ec7f5eaec5565a@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: ddbb4bd5cd3ce1b0a48b0a0d1e4a78d02eb99f98 https://github.com/numpy/numpy/commit/ddbb4bd5cd3ce1b0a48b0a0d1e4a78d02eb99f98 Author: Stefan van der Walt Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M setup.py Log Message: ----------- PKG: Fix minor typo in setup.py. Commit: 3418ffc228a8eaa414f66879301b228d4fc029e8 https://github.com/numpy/numpy/commit/3418ffc228a8eaa414f66879301b228d4fc029e8 Author: Ond?ej ?ert?k Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M setup.py Log Message: ----------- Merge pull request #2744 from stefanv/setup_etal PKG: Fix minor typo in setup.py. Compare: https://github.com/numpy/numpy/compare/067b5f860d29...3418ffc228a8 From noreply at github.com Wed Nov 14 18:02:07 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 15:02:07 -0800 Subject: [Numpy-svn] [numpy/numpy] 1a5afd: PKG: Fix minor typo in setup.py. Message-ID: <50a422ef46721_50481262af41433f@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 1a5afd9a1c4ea5348e494b2c3ccdec2bc5218bfa https://github.com/numpy/numpy/commit/1a5afd9a1c4ea5348e494b2c3ccdec2bc5218bfa Author: Ond?ej ?ert?k Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M setup.py Log Message: ----------- PKG: Fix minor typo in setup.py. This is a backport of ddbb4bd5cd3ce1b0a48b0a0d1e4a78d02eb99f98. From noreply at github.com Wed Nov 14 18:24:04 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 15:24:04 -0800 Subject: [Numpy-svn] [numpy/numpy] dc981d: DOC: document in dev-guide how to write a good com... Message-ID: <50a42814ee1cb_5904198eae42586e@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: dc981d025c6a4a27a7b1fe34d2fa48225904db10 https://github.com/numpy/numpy/commit/dc981d025c6a4a27a7b1fe34d2fa48225904db10 Author: Ralf Gommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_workflow.rst Log Message: ----------- DOC: document in dev-guide how to write a good commit message. Commit: 80bb92442a6f3c727c33a5548d420ef396306405 https://github.com/numpy/numpy/commit/80bb92442a6f3c727c33a5548d420ef396306405 Author: Ralf Gommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_workflow.rst Log Message: ----------- DOC: a few edits to make "Development Workflow" in the dev guide clearer. Commit: f0f366c3f3afa486eee22a240f06fb44a7b87c47 https://github.com/numpy/numpy/commit/f0f366c3f3afa486eee22a240f06fb44a7b87c47 Author: Ralf Gommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_setup.rst M doc/source/dev/gitwash/following_latest.rst M doc/source/dev/gitwash/index.rst R doc/source/dev/gitwash/patching.rst Log Message: ----------- DOC: remove section "Patching" from dev-guide. This section is outdated, and following it pretty much ensures that your patches will languish in Trac. Commit: 674eacf283a7c54a82f4804ee643cb0a29b2aef1 https://github.com/numpy/numpy/commit/674eacf283a7c54a82f4804ee643cb0a29b2aef1 Author: Ralf Gommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_workflow.rst Log Message: ----------- DOC: one more edit to the dev-guide. Recommend to update master before creating your feature branch. Thanks to Nicky van Foreest for feedback on the dev-guide. Commit: 891a66594a2c05d210dd207062a228f87ea771b6 https://github.com/numpy/numpy/commit/891a66594a2c05d210dd207062a228f87ea771b6 Author: Ralf Gommers Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_workflow.rst Log Message: ----------- DOC: expand sections on commit messages and merging/rebasing in the devguide. This commit address comments from Charles on PR #455. Commit: d409bbe41294b2e8ea7a1319e1af48285ce37158 https://github.com/numpy/numpy/commit/d409bbe41294b2e8ea7a1319e1af48285ce37158 Author: Ond?ej ?ert?k Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M doc/source/dev/gitwash/development_setup.rst M doc/source/dev/gitwash/development_workflow.rst M doc/source/dev/gitwash/following_latest.rst M doc/source/dev/gitwash/index.rst R doc/source/dev/gitwash/patching.rst Log Message: ----------- Merge pull request #2740 from certik/backport455 Backport #455 to 1.7.x Compare: https://github.com/numpy/numpy/compare/1a5afd9a1c4e...d409bbe41294 From noreply at github.com Wed Nov 14 18:38:43 2012 From: noreply at github.com (GitHub) Date: Wed, 14 Nov 2012 15:38:43 -0800 Subject: [Numpy-svn] [numpy/numpy] 8ab301: FIX: Mark a tests knownfail on Hurd Message-ID: <50a42b8395948_27711458ae852479@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 8ab301afe1f75b926640c48e278a9b100b8e07d2 https://github.com/numpy/numpy/commit/8ab301afe1f75b926640c48e278a9b100b8e07d2 Author: Ond?ej ?ert?k Date: 2012-11-14 (Wed, 14 Nov 2012) Changed paths: M numpy/core/tests/test_memmap.py Log Message: ----------- FIX: Mark a tests knownfail on Hurd Fixes gh-415. This test raises "Function not implemented" on Hurd: ====================================================================== ERROR: test_flush (test_memmap.TestMemmap) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/buildd-python-numpy_1.7.0~b2-1-hurd-i386-Ws9GSv/python-numpy-1.7.0~b2/debian/tmp/usr/lib/python3/dist-packages/numpy/core/tests/test_memmap.py", line 72, in test_flush fp.flush() File "/build/buildd-python-numpy_1.7.0~b2-1-hurd-i386-Ws9GSv/python-numpy-1.7.0~b2/debian/tmp/usr/lib/python3/dist-packages/numpy/core/memmap.py", line 301, in flush self.base.flush() mmap.error: [Errno 1073741902] Function not implemented Which seems like a Hurd issue: http://web.archiveorange.com/archive/v/dpz3Spjqy0ESHmXKVt7c http://lists.gnu.org/archive/html/bug-hurd/2002-11/msg00243.html So we mark it as knownfail on that platform. From noreply at github.com Fri Nov 16 16:28:30 2012 From: noreply at github.com (GitHub) Date: Fri, 16 Nov 2012 13:28:30 -0800 Subject: [Numpy-svn] [numpy/numpy] e565af: BUG: Fix bug with size 1-dims in CreateSortedStrid... Message-ID: <50a6affe87bc9_7dc16bfae877774@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: e565afb78cdc13aa3274c1cd505d3944c60cf09f https://github.com/numpy/numpy/commit/e565afb78cdc13aa3274c1cd505d3944c60cf09f Author: Sebastian Berg Date: 2012-10-23 (Tue, 23 Oct 2012) Changed paths: M numpy/core/src/multiarray/ctors.c M numpy/core/src/multiarray/dtype_transfer.c M numpy/core/src/multiarray/shape.c M numpy/core/src/umath/reduction.c M numpy/core/tests/test_api.py Log Message: ----------- BUG: Fix bug with size 1-dims in CreateSortedStridePerm This changes CreateSortedStridedPerm to not use the shape for special casing 1-dim axis. The cleanup does not seem to be useful in most cases and the current way is buggy. Also insert stride so that reduce with keepdims=1 will keep contiguous arrays contiguous. "Closes Issue #434" Commit: 3ecbac56ae134c9468fbf041d73e58f002a553a1 https://github.com/numpy/numpy/commit/3ecbac56ae134c9468fbf041d73e58f002a553a1 Author: Ond?ej ?ert?k Date: 2012-11-16 (Fri, 16 Nov 2012) Changed paths: M numpy/core/src/multiarray/ctors.c M numpy/core/src/multiarray/dtype_transfer.c M numpy/core/src/multiarray/shape.c M numpy/core/src/umath/reduction.c M numpy/core/tests/test_api.py Log Message: ----------- Merge pull request #2696 from seberg/issue434 BUG: Fix bug with size 1-dims in CreateSortedStridePerm Compare: https://github.com/numpy/numpy/compare/8ab301afe1f7...3ecbac56ae13 From noreply at github.com Fri Nov 16 16:41:58 2012 From: noreply at github.com (GitHub) Date: Fri, 16 Nov 2012 13:41:58 -0800 Subject: [Numpy-svn] [numpy/numpy] 9fc5e6: BUG: Remove pointer cast from the PyArray_BYTES ma... Message-ID: <50a6b32680a78_7dc16bfae881944@sh3.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: 9fc5e63be058cf4f3fdaecaf20c80131f6aa495f https://github.com/numpy/numpy/commit/9fc5e63be058cf4f3fdaecaf20c80131f6aa495f Author: Frederic Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- BUG: Remove pointer cast from the PyArray_BYTES macro. This fixes a compilation problem encountered with numpy 1.7 when the PyArray_BYTES macro was used as an lvalue in Theano. The macro worked as an lvalue in 1.6 and in 1.7 only the struct name was changed, which makes the problem a bit of a mystery, but Theano compiles with this fix. Commit: abf0489b69496af2c9e19f8bf41356fa511e5f1a https://github.com/numpy/numpy/commit/abf0489b69496af2c9e19f8bf41356fa511e5f1a Author: Charles Harris Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- BUG: Remove pointer cast from the PyArray_DATA macro. This lets PyArray_DATA be used as an lvalue as some compilers raised an error with the previous version. The type is now determined by the type of the struct member and is char*. PyArray_BYTES had the same problem when used as an lvalue in Theano and the same fix is used here. This problem needs a bigger fix at some point as the function equivalent of the macro does not return an lvalue. Commit: b56f31529f3e3992eca54a5e86f1db4f4306ccc2 https://github.com/numpy/numpy/commit/b56f31529f3e3992eca54a5e86f1db4f4306ccc2 Author: Ond?ej ?ert?k Date: 2012-11-16 (Fri, 16 Nov 2012) Changed paths: M numpy/core/include/numpy/ndarraytypes.h Log Message: ----------- Merge pull request #2742 from certik/backport2709 Backport #2709 Compare: https://github.com/numpy/numpy/compare/3ecbac56ae13...b56f31529f3e From noreply at github.com Fri Nov 16 16:42:50 2012 From: noreply at github.com (GitHub) Date: Fri, 16 Nov 2012 13:42:50 -0800 Subject: [Numpy-svn] [numpy/numpy] bab0e4: BUG: Fix complex to bool conversion in lowlevel_st... Message-ID: <50a6b35add331_2aac13c2ae899116@sh2.rs.github.com.mail> Branch: refs/heads/maintenance/1.7.x Home: https://github.com/numpy/numpy Commit: bab0e45d7e807d8fde0582981efea9a8ce1c3d5f https://github.com/numpy/numpy/commit/bab0e45d7e807d8fde0582981efea9a8ce1c3d5f Author: Sebastian Berg Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/src/multiarray/lowlevel_strided_loops.c.src Log Message: ----------- BUG: Fix complex to bool conversion in lowlevel_strided_loops Closes "Ticket 2218". Commit: dc0ca35babcc0fe3fa31bf74e974ba3e898cc69e https://github.com/numpy/numpy/commit/dc0ca35babcc0fe3fa31bf74e974ba3e898cc69e Author: Sebastian Berg Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/core/tests/test_regression.py Log Message: ----------- TST: Complex to bool conversion (Ticket 2218) Commit: 3a52aa06c50e8901a90d54971b7e33b3afd5410b https://github.com/numpy/numpy/commit/3a52aa06c50e8901a90d54971b7e33b3afd5410b Author: Ond?ej ?ert?k Date: 2012-11-16 (Fri, 16 Nov 2012) Changed paths: M numpy/core/src/multiarray/lowlevel_strided_loops.c.src M numpy/core/tests/test_regression.py Log Message: ----------- Merge pull request #2741 from certik/backport477 Backport #477 Compare: https://github.com/numpy/numpy/compare/b56f31529f3e...3a52aa06c50e From noreply at github.com Sat Nov 17 08:23:09 2012 From: noreply at github.com (GitHub) Date: Sat, 17 Nov 2012 05:23:09 -0800 Subject: [Numpy-svn] [numpy/numpy] e1a67c: BUG: core: wrap npy_math.h into extern "C" so that... Message-ID: <50a78fbd98232_743c1bf0ae412380@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: e1a67c3d88b5a7a5d414e80c9eddd88e0676728c https://github.com/numpy/numpy/commit/e1a67c3d88b5a7a5d414e80c9eddd88e0676728c Author: Pauli Virtanen Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/core/include/numpy/npy_math.h Log Message: ----------- BUG: core: wrap npy_math.h into extern "C" so that it works correctly in C++ Commit: 2a5f8ca6b5022e0ad51a95858348b7507a9a7a2f https://github.com/numpy/numpy/commit/2a5f8ca6b5022e0ad51a95858348b7507a9a7a2f Author: njsmith Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/core/include/numpy/npy_math.h Log Message: ----------- Merge pull request #2748 from pv/npymath-extern BUG: core: wrap npy_math.h into extern "C" so that it works correctly in C++ Compare: https://github.com/numpy/numpy/compare/3418ffc228a8...2a5f8ca6b502 From noreply at github.com Sat Nov 17 14:57:57 2012 From: noreply at github.com (GitHub) Date: Sat, 17 Nov 2012 11:57:57 -0800 Subject: [Numpy-svn] [numpy/numpy] ab13a6: ENH: f2py: generate docstrings in Numpy docstring ... Message-ID: <50a7ec451b75b_4ec314d7af0785c6@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: ab13a65447d245e64b59c466827b2415d77ec186 https://github.com/numpy/numpy/commit/ab13a65447d245e64b59c466827b2415d77ec186 Author: Pauli Virtanen Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/f2py/capi_maps.py M numpy/f2py/rules.py M numpy/f2py/src/fortranobject.c M numpy/f2py/tests/test_callback.py M numpy/f2py/tests/test_mixed.py Log Message: ----------- ENH: f2py: generate docstrings in Numpy docstring format Commit: 4b500dd8dbeb6e1c02a32cbc7ab27b5f6db3331f https://github.com/numpy/numpy/commit/4b500dd8dbeb6e1c02a32cbc7ab27b5f6db3331f Author: Pauli Virtanen Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/f2py/rules.py M numpy/f2py/tests/test_callback.py M numpy/f2py/tests/test_mixed.py Log Message: ----------- ENH: f2py: add 'Wrapper for ...' text to the docstring Commit: 7b3e6fa5c8eb92eeab20bfbb6f4298d97396e103 https://github.com/numpy/numpy/commit/7b3e6fa5c8eb92eeab20bfbb6f4298d97396e103 Author: Pauli Virtanen Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/f2py/tests/test_callback.py M numpy/f2py/tests/test_mixed.py Log Message: ----------- TST: f2py: rewrite strings to be easier to read Commit: 277a01e515624d4bfbcc1b66846fcaccb1bc0cea https://github.com/numpy/numpy/commit/277a01e515624d4bfbcc1b66846fcaccb1bc0cea Author: Charles Harris Date: 2012-11-17 (Sat, 17 Nov 2012) Changed paths: M numpy/f2py/capi_maps.py M numpy/f2py/rules.py M numpy/f2py/src/fortranobject.c M numpy/f2py/tests/test_callback.py M numpy/f2py/tests/test_mixed.py Log Message: ----------- Merge pull request #2749 from pv/f2py-docstring ENH: f2py: generate docstrings in Numpy docstring format Compare: https://github.com/numpy/numpy/compare/2a5f8ca6b502...277a01e51562 From noreply at github.com Mon Nov 19 15:26:39 2012 From: noreply at github.com (GitHub) Date: Mon, 19 Nov 2012 12:26:39 -0800 Subject: [Numpy-svn] [numpy/numpy] d8ead4: Include msvcr100 (MSVC v10 aka 2010) in msvc_runti... Message-ID: <50aa95ff339a6_55e813e5ae8126160@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: d8ead4c83364f9c7d4543690eb12e4543c608372 https://github.com/numpy/numpy/commit/d8ead4c83364f9c7d4543690eb12e4543c608372 Author: peterjc Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/distutils/misc_util.py Log Message: ----------- Include msvcr100 (MSVC v10 aka 2010) in msvc_runtime_library() Commit: 1d498f54668a9a87286fa31f2779acbb048edd39 https://github.com/numpy/numpy/commit/1d498f54668a9a87286fa31f2779acbb048edd39 Author: peterjc Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/distutils/mingw32ccompiler.py Log Message: ----------- Cope with two digit major number in MSCV v10 Commit: 24523565b5dbb23d6de0591ef2a4c1d014722c5d https://github.com/numpy/numpy/commit/24523565b5dbb23d6de0591ef2a4c1d014722c5d Author: peterjc Date: 2012-11-12 (Mon, 12 Nov 2012) Changed paths: M numpy/distutils/mingw32ccompiler.py Log Message: ----------- Handle MSVC v10 in _MSVCRVER_TO_FULLVER Commit: 724da615902b9feb140cb6f7307ff1b1c2596a40 https://github.com/numpy/numpy/commit/724da615902b9feb140cb6f7307ff1b1c2596a40 Author: Ralf Gommers Date: 2012-11-19 (Mon, 19 Nov 2012) Changed paths: M numpy/distutils/mingw32ccompiler.py M numpy/distutils/misc_util.py Log Message: ----------- Merge pull request #2726 from peterjc/msvc10 Cope with MSVC v10 aka 2010 Compare: https://github.com/numpy/numpy/compare/277a01e51562...724da615902b From noreply at github.com Wed Nov 21 10:53:28 2012 From: noreply at github.com (GitHub) Date: Wed, 21 Nov 2012 07:53:28 -0800 Subject: [Numpy-svn] [numpy/numpy] bdfae9: BUG: Incorrect type in _attempt_nocopy_reshape Message-ID: <50acf8f84d3c6_85619c6ae881268@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: bdfae97c25a290eb415c3330eb3ef2898dcdc40c https://github.com/numpy/numpy/commit/bdfae97c25a290eb415c3330eb3ef2898dcdc40c Author: Sebastian Berg Date: 2012-11-21 (Wed, 21 Nov 2012) Changed paths: M numpy/core/src/multiarray/shape.c Log Message: ----------- BUG: Incorrect type in _attempt_nocopy_reshape This caused a segmentation fault for some large reshapes as reported by Terry J. Ligocki on the mailing list. Commit: 069323db3d7863d7d777a8329eb76ac07002870e https://github.com/numpy/numpy/commit/069323db3d7863d7d777a8329eb76ac07002870e Author: Charles Harris Date: 2012-11-21 (Wed, 21 Nov 2012) Changed paths: M numpy/core/src/multiarray/shape.c Log Message: ----------- Merge pull request #2754 from seberg/reshape_segfault_issue BUG: Incorrect type in _attempt_nocopy_reshape Compare: https://github.com/numpy/numpy/compare/724da615902b...069323db3d78 From noreply at github.com Wed Nov 21 15:07:14 2012 From: noreply at github.com (GitHub) Date: Wed, 21 Nov 2012 12:07:14 -0800 Subject: [Numpy-svn] [numpy/numpy] 4171e5: Fix setting of fill_value for string columns in Py... Message-ID: <50ad34721c2b1_7d641baaae415652b@sh2.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 4171e5093ff85391458da09342f32dec25822496 https://github.com/numpy/numpy/commit/4171e5093ff85391458da09342f32dec25822496 Author: Thomas Robitaille Date: 2012-11-13 (Tue, 13 Nov 2012) Changed paths: M numpy/ma/core.py M numpy/ma/tests/test_regression.py Log Message: ----------- Fix setting of fill_value for string columns in Python 3 Commit: 15d1aa3b50f22eeb74d27ba7f5ad75b5777b2d87 https://github.com/numpy/numpy/commit/15d1aa3b50f22eeb74d27ba7f5ad75b5777b2d87 Author: Thomas Robitaille Date: 2012-11-20 (Tue, 20 Nov 2012) Changed paths: M numpy/ma/tests/test_regression.py Log Message: ----------- Change test to use np.testing.assert_ Commit: 20224ea62ed42a3ebc0795f62b78309ff9ab1a8a https://github.com/numpy/numpy/commit/20224ea62ed42a3ebc0795f62b78309ff9ab1a8a Author: Ralf Gommers Date: 2012-11-21 (Wed, 21 Nov 2012) Changed paths: M numpy/ma/core.py M numpy/ma/tests/test_regression.py Log Message: ----------- Merge pull request #2733 from astrofrog/fix-fill-value-python3 Fix setting of fill_value for string columns in Python 3 Compare: https://github.com/numpy/numpy/compare/069323db3d78...20224ea62ed4 From noreply at github.com Sat Nov 24 05:22:37 2012 From: noreply at github.com (GitHub) Date: Sat, 24 Nov 2012 02:22:37 -0800 Subject: [Numpy-svn] [numpy/numpy] e33dbf: BUG: Import run_module_suite in test_matlib.py Message-ID: <50b09fed4243f_4dfd17fdaf4891e6@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: e33dbfcc42f2d241f10866e0cb8c08a5922fedc8 https://github.com/numpy/numpy/commit/e33dbfcc42f2d241f10866e0cb8c08a5922fedc8 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/tests/test_matlib.py Log Message: ----------- BUG: Import run_module_suite in test_matlib.py This is needed so test_matlib.py can be run by python. Commit: da5ee659fcc7891794dd18dc48b057eb72f08025 https://github.com/numpy/numpy/commit/da5ee659fcc7891794dd18dc48b057eb72f08025 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/core/tests/test_regression.py Log Message: ----------- BUG: Remove print statement in test_endian_recarray. This print statement was responsible for the annoying 1 that showed up in the test output stream. Commit: 1065cc5f9565fd28b6b31c1d6c8004335298e21c https://github.com/numpy/numpy/commit/1065cc5f9565fd28b6b31c1d6c8004335298e21c Author: Ralf Gommers Date: 2012-11-24 (Sat, 24 Nov 2012) Changed paths: M numpy/core/tests/test_regression.py M numpy/tests/test_matlib.py Log Message: ----------- Merge pull request #2767 from charris/fix-buglets Maint: fix buglets Compare: https://github.com/numpy/numpy/compare/20224ea62ed4...1065cc5f9565 From noreply at github.com Sat Nov 24 05:54:50 2012 From: noreply at github.com (GitHub) Date: Sat, 24 Nov 2012 02:54:50 -0800 Subject: [Numpy-svn] [numpy/numpy] 649c90: Assume we can use sys.stdout.fileno() and friends. Message-ID: <50b0a77ac341_593d87ae861713@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 649c90831075b5141b56e321f21c576ee58a06a6 https://github.com/numpy/numpy/commit/649c90831075b5141b56e321f21c576ee58a06a6 Author: Gabriel Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/distutils/exec_command.py Log Message: ----------- Assume we can use sys.stdout.fileno() and friends. The workaround shouldn't be necessary in a recent python shell. Tested in python, ipython. In fact, distutils is almost never imported and run manually from an interactive shell. This removes the use of `sys.__stdout__`, which broke with distribute 0.6.30 on Python 3. Commit: df2958e28d5542d1ae515f6ed0ba1fc0a1c728bd https://github.com/numpy/numpy/commit/df2958e28d5542d1ae515f6ed0ba1fc0a1c728bd Author: Gabriel Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/distutils/exec_command.py Log Message: ----------- Code cleanup Commit: 089bfa5865cd39e2b40099755e8563d8f0d04f5f https://github.com/numpy/numpy/commit/089bfa5865cd39e2b40099755e8563d8f0d04f5f Author: Ralf Gommers Date: 2012-11-24 (Sat, 24 Nov 2012) Changed paths: M numpy/distutils/exec_command.py Log Message: ----------- Merge pull request #2766 from g2p/master Assume we can use sys.stdout.fileno() and friends. Compare: https://github.com/numpy/numpy/compare/1065cc5f9565...089bfa5865cd From noreply at github.com Sun Nov 25 12:25:08 2012 From: noreply at github.com (GitHub) Date: Sun, 25 Nov 2012 09:25:08 -0800 Subject: [Numpy-svn] [numpy/numpy] 38c150: BUG: gh-2757, masked array var method should zero ... Message-ID: <50b25474a987d_77aa1201aec1823f2@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 38c150c20fa0b141aa1189b67dbaa781ee90b457 https://github.com/numpy/numpy/commit/38c150c20fa0b141aa1189b67dbaa781ee90b457 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/ma/core.py Log Message: ----------- BUG: gh-2757, masked array var method should zero masked out parameter. When a is a 1-d masked array with all values masked and b is a 0-d masked array, then a.var(out=b) fails to set the underlying masked value of b, causing an invalid value warning to be raised in a.std(out=b) whenever b contained a masked negative number. This fix sets the underlying value to 0, which is consistent with the n-d case. A better fix might be to add an out parameter to the masked array ufuncs, but that is a bigger project. Commit: 7678c988f88305bfb9be516700e8e05d902f1631 https://github.com/numpy/numpy/commit/7678c988f88305bfb9be516700e8e05d902f1631 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/ma/tests/test_regression.py Log Message: ----------- TST: Add test for gh-2757. Commit: 65ed5ebfeac3fb6ff8896bf624e1e08113901b76 https://github.com/numpy/numpy/commit/65ed5ebfeac3fb6ff8896bf624e1e08113901b76 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/ma/core.py Log Message: ----------- MAINT: Avoid unneeded call in masked array std method. The square root of the variance was taken twice when the out parameter was specified. Commit: 1871820bf16635270a124ba577282ec00cb093a7 https://github.com/numpy/numpy/commit/1871820bf16635270a124ba577282ec00cb093a7 Author: Charles Harris Date: 2012-11-23 (Fri, 23 Nov 2012) Changed paths: M numpy/ma/tests/test_core.py Log Message: ----------- MAINT: In test_varstd_specialcases out parameters should be 0-d. The original worked, but that is because the masked array methods are not properly checking dimensions in this case. That should also be fixed at some point. Commit: 0d593f2aa13ebf865a62a74b9085f554d33b275c https://github.com/numpy/numpy/commit/0d593f2aa13ebf865a62a74b9085f554d33b275c Author: Charles Harris Date: 2012-11-25 (Sun, 25 Nov 2012) Changed paths: M numpy/ma/core.py M numpy/ma/tests/test_core.py M numpy/ma/tests/test_regression.py Log Message: ----------- Merge pull request #2765 from charris/fix-travis-heisenbug Fix travis heisenbug Compare: https://github.com/numpy/numpy/compare/089bfa5865cd...0d593f2aa13e From noreply at github.com Sun Nov 25 16:34:15 2012 From: noreply at github.com (GitHub) Date: Sun, 25 Nov 2012 13:34:15 -0800 Subject: [Numpy-svn] [numpy/numpy] f3905d: FIX: Use 'pip' for travis build. Message-ID: <50b28ed732c2f_aceec5af41580a9@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: f3905dc9fe00382e7ac666bacabc429c8b92d634 https://github.com/numpy/numpy/commit/f3905dc9fe00382e7ac666bacabc429c8b92d634 Author: Nathaniel J. Smith Date: 2012-11-25 (Sun, 25 Nov 2012) Changed paths: M .travis.yml Log Message: ----------- FIX: Use 'pip' for travis build. Closes gh-2768. Commit: 02447200226894e15ee6bd61ca94e28fedf3e4a4 https://github.com/numpy/numpy/commit/02447200226894e15ee6bd61ca94e28fedf3e4a4 Author: njsmith Date: 2012-11-25 (Sun, 25 Nov 2012) Changed paths: M .travis.yml Log Message: ----------- Merge pull request #2769 from njsmith/fix-travis-reinstall FIX: Use 'pip' for travis build Compare: https://github.com/numpy/numpy/compare/0d593f2aa13e...024472002268 From noreply at github.com Mon Nov 26 15:17:21 2012 From: noreply at github.com (GitHub) Date: Mon, 26 Nov 2012 12:17:21 -0800 Subject: [Numpy-svn] [numpy/numpy] 4ddb4d: ENH: Add rfftfreq() for numpy's rfft(), which beha... Message-ID: <50b3ce5113161_8281b26af09213d@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 4ddb4df47c156bee8271ca4ac444a6760d321e32 https://github.com/numpy/numpy/commit/4ddb4df47c156bee8271ca4ac444a6760d321e32 Author: endolith Date: 2012-10-13 (Sat, 13 Oct 2012) Changed paths: M numpy/fft/helper.py Log Message: ----------- ENH: Add rfftfreq() for numpy's rfft(), which behaves differently from scipy's rfft()/rfftfreq(). Commit: 2e2f4522275af6e256c243e2b43bf5fc1d37b07c https://github.com/numpy/numpy/commit/2e2f4522275af6e256c243e2b43bf5fc1d37b07c Author: endolith Date: 2012-10-13 (Sat, 13 Oct 2012) Changed paths: M numpy/fft/fftpack.py M numpy/fft/helper.py Log Message: ----------- DOC: Clarify size of odd-length FFTs, default `d` for fftfreq, and some PEP8 style fixes Commit: 9bd89e470c3f3128f6a61fe9fa133a99b7887bbd https://github.com/numpy/numpy/commit/9bd89e470c3f3128f6a61fe9fa133a99b7887bbd Author: endolith Date: 2012-11-18 (Sun, 18 Nov 2012) Changed paths: M numpy/fft/helper.py Log Message: ----------- MAINT: Don't use assert to check variable type Commit: a3dbac20451f686acfb8597e1da9604a8ab7185d https://github.com/numpy/numpy/commit/a3dbac20451f686acfb8597e1da9604a8ab7185d Author: endolith Date: 2012-11-24 (Sat, 24 Nov 2012) Changed paths: M numpy/fft/fftpack.py Log Message: ----------- DOC: Clarify the frequencies of the rfft using fs, borrowing text from numpy.fft docstring Commit: 625b426e77b159c2f7036de05fb3184f40e51bc1 https://github.com/numpy/numpy/commit/625b426e77b159c2f7036de05fb3184f40e51bc1 Author: endolith Date: 2012-11-24 (Sat, 24 Nov 2012) Changed paths: M numpy/fft/tests/test_helper.py Log Message: ----------- TST: Add a test for the rfftfreq() function Commit: b6ea9f411b77cdd6e6013d8b4e329671c5032e62 https://github.com/numpy/numpy/commit/b6ea9f411b77cdd6e6013d8b4e329671c5032e62 Author: endolith Date: 2012-11-25 (Sun, 25 Nov 2012) Changed paths: M numpy/fft/info.py Log Message: ----------- DOC: Add rfftfreq to Helper routines in fft module's docstring Commit: 749e5c1c47a12530018839edf8358457d74224ad https://github.com/numpy/numpy/commit/749e5c1c47a12530018839edf8358457d74224ad Author: endolith Date: 2012-11-25 (Sun, 25 Nov 2012) Changed paths: M numpy/fft/helper.py Log Message: ----------- DOC: Fix length mistake in docstring (rfft length is n//2+1, not n) Commit: 2596867bd3165fcde339cbb06d8879085bc5d3b1 https://github.com/numpy/numpy/commit/2596867bd3165fcde339cbb06d8879085bc5d3b1 Author: endolith Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/fft/fftpack.py M numpy/fft/helper.py Log Message: ----------- DOC: Reword "Hermite symmetry", clarify units of sample spacing Commit: dcc2633805d248bbf27e676a562b63edbde6dfea https://github.com/numpy/numpy/commit/dcc2633805d248bbf27e676a562b63edbde6dfea Author: endolith Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/fft/helper.py Log Message: ----------- DOC: remove "the" from description, single backticks are for variables only Commit: 83ca0fde4e62f0e7190f2609bc8944ed2a14261e https://github.com/numpy/numpy/commit/83ca0fde4e62f0e7190f2609bc8944ed2a14261e Author: Ralf Gommers Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/fft/fftpack.py M numpy/fft/helper.py M numpy/fft/info.py M numpy/fft/tests/test_helper.py Log Message: ----------- Merge pull request #484 from endolith/rfftfreq_and_fft_docstrings ENH: add rfftfreq() and DOC: cleanup fft docstrings Compare: https://github.com/numpy/numpy/compare/024472002268...83ca0fde4e62 From noreply at github.com Mon Nov 26 15:18:35 2012 From: noreply at github.com (GitHub) Date: Mon, 26 Nov 2012 12:18:35 -0800 Subject: [Numpy-svn] [numpy/numpy] 840cbb: DOC: Further tweaks to histogram2d docstring. Message-ID: <50b3ce9b87b9a_8281b26af0927b0@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 840cbbe04023f99b1e4235152e06a16dfd8a0879 https://github.com/numpy/numpy/commit/840cbbe04023f99b1e4235152e06a16dfd8a0879 Author: Stefan van der Walt Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/lib/twodim_base.py Log Message: ----------- DOC: Further tweaks to histogram2d docstring. Commit: f83663870f9d29753ae3c2b36615ea1c9421e00b https://github.com/numpy/numpy/commit/f83663870f9d29753ae3c2b36615ea1c9421e00b Author: Ralf Gommers Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/lib/twodim_base.py Log Message: ----------- Merge pull request #2691 from stefanv/histogram_2d_doc DOC: Clarify confusing histogram2d docstring. Compare: https://github.com/numpy/numpy/compare/83ca0fde4e62...f83663870f9d From noreply at github.com Mon Nov 26 15:49:52 2012 From: noreply at github.com (GitHub) Date: Mon, 26 Nov 2012 12:49:52 -0800 Subject: [Numpy-svn] [numpy/numpy] 9f1b87: TST: also filter Cython warnings in NoseTester. S... Message-ID: <50b3d5f0ebab1_8281b26af01044e2@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 9f1b8721dc2e1b69112fa5b94b3a70b37661cc84 https://github.com/numpy/numpy/commit/9f1b8721dc2e1b69112fa5b94b3a70b37661cc84 Author: Ralf Gommers Date: 2012-11-21 (Wed, 21 Nov 2012) Changed paths: M numpy/testing/nosetester.py Log Message: ----------- TST: also filter Cython warnings in NoseTester. See PR-432. There a resetwarnings() call, so need to add back these filters. Commit: b209e190994c31b95bba3acf9936c451a01e1e31 https://github.com/numpy/numpy/commit/b209e190994c31b95bba3acf9936c451a01e1e31 Author: Ralf Gommers Date: 2012-11-26 (Mon, 26 Nov 2012) Changed paths: M numpy/testing/nosetester.py Log Message: ----------- Merge pull request #2758 from rgommers/cython-warnings TST: also filter Cython warnings in NoseTester. See PR-432. Compare: https://github.com/numpy/numpy/compare/f83663870f9d...b209e190994c From noreply at github.com Tue Nov 27 15:24:18 2012 From: noreply at github.com (GitHub) Date: Tue, 27 Nov 2012 12:24:18 -0800 Subject: [Numpy-svn] [numpy/numpy] 3e99f3: Don't reset the fill_value of a MaskedArray when c... Message-ID: <50b52172eac4e_72371664ae43135e@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 3e99f32b8e32fcb7bd16c7c4a3163e778d07cdc6 https://github.com/numpy/numpy/commit/3e99f32b8e32fcb7bd16c7c4a3163e778d07cdc6 Author: Thomas Robitaille Date: 2012-10-31 (Wed, 31 Oct 2012) Changed paths: M numpy/ma/core.py Log Message: ----------- Don't reset the fill_value of a MaskedArray when calling view() with no dtype Commit: 2a43ed339f1350872207b9871ebdc3fbd0a68d26 https://github.com/numpy/numpy/commit/2a43ed339f1350872207b9871ebdc3fbd0a68d26 Author: Thomas Robitaille Date: 2012-11-20 (Tue, 20 Nov 2012) Changed paths: M numpy/ma/core.py Log Message: ----------- Added a `fill_value` keyword to `MaskedArray.view`, and clarify the behavior in the docstring. Commit: 4bacc463602fb7acf3729fb54a5f9797c0038501 https://github.com/numpy/numpy/commit/4bacc463602fb7acf3729fb54a5f9797c0038501 Author: Thomas Robitaille Date: 2012-11-20 (Tue, 20 Nov 2012) Changed paths: M numpy/ma/core.py M numpy/ma/tests/test_core.py Log Message: ----------- Added test for fill_value behavior in MaskedArray.view, and use fill_value to set the fill value, rather than _fill_value, since using fill_value takes care of setting _fill_value to an array. Commit: ab66c255dc867ac00450960adeac29910dc4fa66 https://github.com/numpy/numpy/commit/ab66c255dc867ac00450960adeac29910dc4fa66 Author: Thomas Robitaille Date: 2012-11-22 (Thu, 22 Nov 2012) Changed paths: M numpy/ma/core.py M numpy/ma/tests/test_core.py Log Message: ----------- Clarified MaskedArray.view documentation, and added more tests Commit: dba24990f8bef9a5a1e67ef86ff6c58d8f59082f https://github.com/numpy/numpy/commit/dba24990f8bef9a5a1e67ef86ff6c58d8f59082f Author: Thomas Robitaille Date: 2012-11-22 (Thu, 22 Nov 2012) Changed paths: M numpy/add_newdocs.py M numpy/ma/core.py Log Message: ----------- Improvements to ndarray.view docstring Commit: dadf5b992802edc6d286b2ea3fd8e446759ad998 https://github.com/numpy/numpy/commit/dadf5b992802edc6d286b2ea3fd8e446759ad998 Author: Thomas Robitaille Date: 2012-11-22 (Thu, 22 Nov 2012) Changed paths: M numpy/ma/tests/test_core.py Log Message: ----------- Minor fix to fill_view test Commit: 09d82ea2cd0664c7dbbf1b8c17700b0b71a05278 https://github.com/numpy/numpy/commit/09d82ea2cd0664c7dbbf1b8c17700b0b71a05278 Author: Ralf Gommers Date: 2012-11-27 (Tue, 27 Nov 2012) Changed paths: M numpy/add_newdocs.py M numpy/ma/core.py M numpy/ma/tests/test_core.py Log Message: ----------- Merge pull request #2703 from astrofrog/fix-masked-fill-view Don't reset the fill_value of a MaskedArray when calling view() with no dtype Compare: https://github.com/numpy/numpy/compare/b209e190994c...09d82ea2cd06 From noreply at github.com Fri Nov 30 14:23:16 2012 From: noreply at github.com (GitHub) Date: Fri, 30 Nov 2012 11:23:16 -0800 Subject: [Numpy-svn] [numpy/numpy] 9c0253: Add note about definition list classifier format Message-ID: <50b907a45495c_51fe15dcaf48831a@sh3.rs.github.com.mail> Branch: refs/heads/master Home: https://github.com/numpy/numpy Commit: 9c02535a58e0faa12dc3186129753d46001998a3 https://github.com/numpy/numpy/commit/9c02535a58e0faa12dc3186129753d46001998a3 Author: endolith Date: 2012-11-30 (Fri, 30 Nov 2012) Changed paths: M doc/HOWTO_DOCUMENT.rst.txt Log Message: ----------- Add note about definition list classifier format and some other small changes Commit: 2e28619f968cf053d936c036752c96a31e49ab97 https://github.com/numpy/numpy/commit/2e28619f968cf053d936c036752c96a31e49ab97 Author: Ralf Gommers Date: 2012-11-30 (Fri, 30 Nov 2012) Changed paths: M doc/HOWTO_DOCUMENT.rst.txt Log Message: ----------- Merge pull request #2774 from endolith/patch-3 Add note about definition list classifier format Compare: https://github.com/numpy/numpy/compare/09d82ea2cd06...2e28619f968c