[issue27658] python 3.5.2 built from source fails to install completely on Mac OS X 10.11.6. Crashes subsequently.
Mario Grgic
report at bugs.python.org
Sat Jul 30 18:19:49 EDT 2016
New submission from Mario Grgic:
I am on Mac OS X 10.11.6 trying to build and install Python 3.5.2 from source. I only have system Python 2.7.10 , and no other instances of Python 3.x.
I configure the build as follows:
./configure --prefix=/Volumes/ramdisk/python3.5.2
The code is built without errors, but when I issue
make install
I get:
cd /Volumes/ramdisk/python3.5.2/share/man/man1; ln -s python3.5.1 python3.1)
if test "xupgrade" != "xno" ; then \
case upgrade in \
upgrade) ensurepip="--upgrade" ;; \
install|*) ensurepip="" ;; \
esac; \
./python.exe -E -m ensurepip \
$ensurepip --root=/ ; \
fi
Ignoring indexes: https://pypi.python.org/simple
Collecting setuptools
Collecting pip
Installing collected packages: setuptools, pip
/bin/sh: line 7: 15831 Segmentation fault: 11 ./python.exe -E -m ensurepip $ensurepip --root=/
Makefile:1059: recipe for target 'install' failed
make: *** [install] Error 139
which crashes the system Python 2.7.10:
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libcrypto.1.0.0.dylib 0x0000000108c82d51 EVP_PKEY_CTX_free + 17
1 libcrypto.1.0.0.dylib 0x0000000108c77742 EVP_MD_CTX_cleanup + 130
2 libcrypto.1.0.0.dylib 0x0000000108c77a9d EVP_DigestFinal + 29
3 _hashlib.cpython-35m-darwin.so 0x0000000108c05d6b EVP_digest + 155 (_hashopenssl.c:148)
4 python.exe 0x000000010835493e PyEval_EvalFrameEx + 24110 (ceval.c:4684)
5 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
6 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
7 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
8 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
9 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
10 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
11 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
12 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
13 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
14 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
15 python.exe 0x000000010834eaee PyEval_EvalCodeEx + 78 (ceval.c:4039)
16 python.exe 0x00000001082b743d function_call + 381 (funcobject.c:627)
17 python.exe 0x000000010828ddd5 PyObject_Call + 101 (abstract.c:2162)
18 python.exe 0x00000001083556a0 PyEval_EvalFrameEx + 27536 (ceval.c:5034)
19 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
20 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
21 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
22 python.exe 0x0000000108359ee2 fast_function + 338 (ceval.c:4803)
23 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
24 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
25 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
26 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
27 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
28 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
29 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
30 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
31 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
32 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
33 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
34 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
35 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
36 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
37 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
38 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
39 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
40 python.exe 0x000000010834ea91 PyEval_EvalCode + 81 (ceval.c:777)
41 python.exe 0x000000010834c2e0 builtin_exec + 528 (bltinmodule.c:957)
42 python.exe 0x00000001082d6ea5 PyCFunction_Call + 165 (methodobject.c:121)
43 python.exe 0x0000000108354f00 PyEval_EvalFrameEx + 25584 (ceval.c:4705)
44 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
45 python.exe 0x0000000108359f60 fast_function + 464 (ceval.c:4818)
46 python.exe 0x000000010835484f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
47 python.exe 0x00000001083596f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
48 python.exe 0x000000010834eaee PyEval_EvalCodeEx + 78 (ceval.c:4039)
49 python.exe 0x00000001082b743d function_call + 381 (funcobject.c:627)
50 python.exe 0x000000010828ddd5 PyObject_Call + 101 (abstract.c:2162)
51 python.exe 0x00000001083976e3 RunModule + 147 (main.c:208)
52 python.exe 0x00000001083970fe Py_Main + 2526 (main.c:709)
53 python.exe 0x00000001082831cd main + 237 (python.c:65)
54 libdyld.dylib 0x00007fff9523b5ad start + 1
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x149dd2af96bf4325 rcx: 0x00000000000fc080 rdx: 0x0000000000031db0
rdi: 0x149dd2af96bf4325 rsi: 0x000000010856be00 rbp: 0x00007fff5797b130 rsp: 0x00007fff5797b120
r8: 0x0000000000000003 r9: 0x00007fb96b5ba1f0 r10: 0x00000000072e2888 r11: 0x00007fb96b500000
r12: 0x0a0061d3943a3792 r13: 0x0000000109a59fc0 r14: 0x0000000000000001 r15: 0x00007fff5797b1a0
rip: 0x0000000108c82d51 rfl: 0x0000000000010202 cr2: 0x0000000108c82d40
Logical CPU: 2
Error Code: 0x00000000
Trap Number: 13
--------------------------------------------------------
If I add partially installed python 3.5.2 on the system PATH and add
alias python=python3
so the makefile calls python3 instead, then installation completes successfully.
However, if I now try running pip3 from python3.5.2/bin installation I get another crash in python3 now
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000011
VM Regions Near 0x11:
-->
__TEXT 00000001025cd000-0000000102778000 [ 1708K] r-x/rwx SM=COW /Volumes/VOLUME/*/*.5
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libcrypto.1.0.0.dylib 0x0000000103301f79 EVP_PKEY_CTX_dup + 25
1 libcrypto.1.0.0.dylib 0x00000001032f692a EVP_MD_CTX_copy_ex + 282
2 _hashlib.cpython-35m-darwin.so 0x0000000103284e03 EVP_hexdigest + 99 (_hashopenssl.c:113)
3 python3.5 0x000000010269f93e PyEval_EvalFrameEx + 24110 (ceval.c:4684)
4 python3.5 0x00000001026a4ee2 fast_function + 338 (ceval.c:4803)
5 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
6 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
7 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
8 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
9 python3.5 0x00000001026a4ee2 fast_function + 338 (ceval.c:4803)
10 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
11 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
12 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
13 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
14 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
15 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
16 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
17 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
18 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
19 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
20 python3.5 0x00000001026a4ee2 fast_function + 338 (ceval.c:4803)
21 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
22 python3.5 0x00000001026a4ee2 fast_function + 338 (ceval.c:4803)
23 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
24 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
25 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
26 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
27 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
28 python3.5 0x00000001026a4f60 fast_function + 464 (ceval.c:4818)
29 python3.5 0x000000010269f84f PyEval_EvalFrameEx + 23871 (ceval.c:4730)
30 python3.5 0x00000001026a46f2 _PyEval_EvalCodeWithName + 4194 (ceval.c:4018)
31 python3.5 0x0000000102699a91 PyEval_EvalCode + 81 (ceval.c:777)
32 python3.5 0x00000001026ca581 PyRun_FileExFlags + 209 (pythonrun.c:976)
33 python3.5 0x00000001026c9c7c PyRun_SimpleFileExFlags + 668 (pythonrun.c:396)
34 python3.5 0x00000001026e23f4 Py_Main + 3284 (main.c:318)
35 python3.5 0x00000001025ce1cd main + 237 (python.c:65)
36 libdyld.dylib 0x00007fff9523b5ad start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff83afb5e2 __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff95a85578 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff95a83341 start_wqthread + 13
Thread 2:: Dispatch queue: com.apple.libdispatch-manager
0 libsystem_kernel.dylib 0x00007fff83afbefa kevent_qos + 10
1 libdispatch.dylib 0x00007fff956af165 _dispatch_mgr_invoke + 216
2 libdispatch.dylib 0x00007fff956aedcd _dispatch_mgr_thread + 52
Thread 3:
0 libsystem_kernel.dylib 0x00007fff83afb5e2 __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff95a85578 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff95a83341 start_wqthread + 13
Thread 4:
0 libsystem_kernel.dylib 0x00007fff83afb5e2 __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff95a85578 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff95a83341 start_wqthread + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000001 rbx: 0x0000000103b75f48 rcx: 0x0000000000000010 rdx: 0xffffffffffffffd4
rdi: 0x00007fdb83c51140 rsi: 0x00007fdb83ca1410 rbp: 0x00007fff5d630c40 rsp: 0x00007fff5d630c30
r8: 0x0000000000000006 r9: 0x0000000000000000 r10: 0x00000000ffffffff r11: 0x00000000000027c0
r12: 0x990018d2e679ec80 r13: 0x0000000103c78288 r14: 0x00007fff5d630c80 r15: 0x00007fdb83ca3b80
rip: 0x0000000103301f79 rfl: 0x0000000000010202 cr2: 0x0000000000000011
Logical CPU: 2
Error Code: 0x00000004
Trap Number: 14
----------
components: Installation
messages: 271710
nosy: Mario Grgic
priority: normal
severity: normal
status: open
title: python 3.5.2 built from source fails to install completely on Mac OS X 10.11.6. Crashes subsequently.
type: crash
versions: Python 3.5
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<http://bugs.python.org/issue27658>
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