Overlap in python

Mark Lawrence breamoreboy at yahoo.co.uk
Wed Aug 5 17:52:08 CEST 2009


Jay Bird wrote:
> Hi everyone,
> 
> I wanted to thank you all for your help and *excellent* discussion.  I
> was able to utilize and embed the script by Grigor Lingl in the 6th
> post of this discussion to get my program to work very quickly (I had
> to do about 20 comparisons per data bin, with over 40K bins in
> total).  I am involved in genomic analysis research and this problem
> comes up a lot and I was surprised to not have been able to find a
> clear way to solve it.  I will also look through all the tips in this
> thread, I have a feeling they may come in handy for future use!
> 
> Thank you again,
> Jay
I don't know if this is relevant, but http://planet.python.org/ has an 
entry dated this morning which points here 
http://www.logarithmic.net/pfh/blog/01249470842.

HTH.

-- 
Kindest regards.

Mark Lawrence.




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