Extracting matrix from a text file
MRAB
python at mrabarnett.plus.com
Fri Aug 7 13:29:23 EDT 2009
alex23 wrote:
> On Aug 8, 2:19 am, bbarb... at inescporto.pt wrote:
>> I am new in python, and I am running it on Mac with Smultron editor. I
>> need to read a textfile that includes numbers (in a matrix form),
>> indexes, and strings, like this:
>>
>> Marsyas-kea distance matrix for MIREX 2007 Audio Similarity Exchange
>> Q/R 1 2 3 4 5
>> 1 0 4.54592 4.36685 5.29463 3.85728
>> 2 4.54592 0 3.97667 5.02151 4.64284
>> 3 4.36685 3.97667 0 4.98743 4.83683
>> 4 5.29463 5.02151 4.98743 0 6.04393
>> 5 3.85728 4.64284 4.83683 6.04393 0
>>
>> So I just want to keep the matrix in the "middle" for math computations.
>>
>> 0 4.54592 4.36685 5.29463 3.85728
>> 4.54592 0 3.97667 5.02151 4.64284
>> 4.36685 3.97667 0 4.98743 4.83683
>> 5.29463 5.02151 4.98743 0 6.04393
>> 3.85728 4.64284 4.83683 6.04393 0
>>
>> I've seen and tried a lot of ways, like split or isinstance.. but
>> never get the wanted result.... does anyone have an idea, or hint?
>> Thank you once more for your help!
>
>
> isinstance? Are you just randomly trying functions hoping they'll
> work? :)
>
> Untested code follows:
>
> with open(<textfile>,'r') as textfile:
> header = textfile.next() # skip the header
> col_0_size = 8 # cos it does
> for line in textfile:
> newline = line[col_0_size:] # strip off the index column
> columns = newline.split(' ') # will give you a tuple of
> strings
[snip]
Or:
columns = line.split(' ')[1 : ]
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