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Banibrata Dutta banibrata.dutta at gmail.com
Mon Jul 6 07:37:19 CEST 2009


On Sat, Jul 4, 2009 at 9:51 PM, <amrita at iisermohali.ac.in> wrote:

> Hi,
>
> I want to know that whether using python programming is it possible to
> extract chemical shift information about some amino acids of some protein
> from BMRB(BioMagResBank) or Ref-DB(referenced databank) or not.
>
> Thanks,
> Amrita Kumari
> Research Fellow
> IISER Mohali
> Chandigarh
> INDIA
>

Without any real knowledge of the problem domain, but with keyword level
google search, here's one one finds --
http://www.ccpn.ac.uk/api-documentation/ccpnmr/ccpnmr2.0/python/doc/api.html
<http://www.ccpn.ac.uk/api-documentation/ccpnmr/ccpnmr2.0/python/doc/api.html>
http://biopython.org/wiki/Main_Page
<http://biopython.org/wiki/Main_Page>http://chempython.org/
<http://chempython.org/>http://www.sschwarzer.net/

Also as Grant says, if you can create a software program in any language,
you can potentially do it with Python as well. As Python is a "batteries
included" language, chances are, the included-batteries would make your life
easier. Of course mileage may vary. If you find existing modules that do
much of what you want, you have a very good starting point.
-- 
regards,
Banibrata
http://www.linkedin.com/in/bdutta
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