Embedding Python crash on PyTuple_New

Arnaud Loonstra arnaud at sphaero.org
Wed Nov 24 02:59:15 EST 2021


On 24-11-2021 01:46, MRAB wrote:
> On 2021-11-23 20:25, Arnaud Loonstra wrote:
>> On 23-11-2021 18:31, MRAB wrote:
>>> On 2021-11-23 16:04, Arnaud Loonstra wrote:
>>>> On 23-11-2021 16:37, MRAB wrote:
>>>>> On 2021-11-23 15:17, MRAB wrote:
>>>>>> On 2021-11-23 14:44, Arnaud Loonstra wrote:
>>>>>>> On 23-11-2021 15:34, MRAB wrote:
>>>>>>>> On 2021-11-23 12:07, Arnaud Loonstra wrote:
>>>>>>>>> Hi,
>>>>>>>>>
>>>>>>>>> I've got Python embedded successfully in a program up until now 
>>>>>>>>> as I'm
>>>>>>>>> now running into weird GC related segfaults. I'm currently 
>>>>>>>>> trying to
>>>>>>>>> debug this but my understanding of CPython limits me here.
>>>>>>>>>
>>>>>>>>> I'm creating a Tuple in C but it crashes on creating it after a 
>>>>>>>>> while.
>>>>>>>>> It doesn't make sense which makes me wonder something else must be
>>>>>>>>> happening? Could be it just crashes here because the GC is 
>>>>>>>>> cleaning up
>>>>>>>>> stuff completely unrelated to the allocation of the new tuple? 
>>>>>>>>> How can I
>>>>>>>>> troubleshoot this?
>>>>>>>>>
>>>>>>>>> I've got CPython compiled with  --with-valgrind --without-pymalloc
>>>>>>>>> --with-pydebug
>>>>>>>>>
>>>>>>>>> In C I'm creating a tuple with the following method:
>>>>>>>>>
>>>>>>>>> static PyObject *
>>>>>>>>> s_py_zosc_tuple(pythonactor_t *self, zosc_t *oscmsg)
>>>>>>>>> {
>>>>>>>>>       assert(self);
>>>>>>>>>       assert(oscmsg);
>>>>>>>>>       char *format = zosc_format(oscmsg);
>>>>>>>>>
>>>>>>>>>       PyObject *rettuple = PyTuple_New((Py_ssize_t) 
>>>>>>>>> strlen(format) );
>>>>>>>>>
>>>>>>>>> It segfaults here (frame 16) after 320 times (consistently)
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> 1   __GI_raise             raise.c          49   0x7ffff72c4e71
>>>>>>>>> 2   __GI_abort             abort.c          79   0x7ffff72ae536
>>>>>>>>> 3   fatal_error            pylifecycle.c    2183 0x7ffff7d84b4f
>>>>>>>>> 4   Py_FatalError          pylifecycle.c    2193 0x7ffff7d878b2
>>>>>>>>> 5   _PyObject_AssertFailed object.c         2200 0x7ffff7c93cf2
>>>>>>>>> 6   visit_decref           gcmodule.c       378  0x7ffff7dadfd5
>>>>>>>>> 7   tupletraverse          tupleobject.c    623  0x7ffff7ca3e81
>>>>>>>>> 8   subtract_refs          gcmodule.c       406  0x7ffff7dad340
>>>>>>>>> 9   collect                gcmodule.c       1054 0x7ffff7dae838
>>>>>>>>> 10  collect_with_callback  gcmodule.c       1240 0x7ffff7daf17b
>>>>>>>>> 11  collect_generations    gcmodule.c       1262 0x7ffff7daf3f6
>>>>>>>>> 12  _PyObject_GC_Alloc     gcmodule.c       1977 0x7ffff7daf4f2
>>>>>>>>> 13  _PyObject_GC_Malloc    gcmodule.c       1987 0x7ffff7dafebc
>>>>>>>>> 14  _PyObject_GC_NewVar    gcmodule.c       2016 0x7ffff7daffa5
>>>>>>>>> 15  PyTuple_New            tupleobject.c    118  0x7ffff7ca4da7
>>>>>>>>> 16  s_py_zosc_tuple        pythonactor.c    366  0x55555568cc82
>>>>>>>>> 17  pythonactor_socket     pythonactor.c    664  0x55555568dac7
>>>>>>>>> 18  pythonactor_handle_msg pythonactor.c    862  0x55555568e472
>>>>>>>>> 19  pythonactor_handler    pythonactor.c    828  0x55555568e2e2
>>>>>>>>> 20  sphactor_actor_run     sphactor_actor.c 855  0x5555558cb268
>>>>>>>>> ... <More>
>>>>>>>>>
>>>>>>>>> Any pointer really appreciated.

[snip]

>>>>
>>> Basically, yes, but I won't be surprised if it was due to too few 
>>> INCREFs or too many DECREFs somewhere.
>>>
>>>> https://github.com/hku-ect/gazebosc/blob/505b30c46bf3f78d188c3f575c80e294d3db7e5d/Actors/pythonactor.c#L286 
>>>>
>>>>
>>> Incidentally, in s_py_zosc_tuple, you're not doing "assert(rc == 0);" 
>>> after "after zosc_pop_float" or "zosc_pop_double".
>>
>> Thanks for those pointers! I think your intuition is right. I might have
>> found the bugger. In s_py_zosc I call Py_DECREF on pAddress and pData.
>> However they are acquired by PyTuple_GetItem which returns a borrowed
>> reference. I think pAddress and pData are then also 'decrefed' when the
>> pReturn tuple which contains pAddress and pData is 'decrefed'?
>>
> Yes, members of a container are DECREFed when the container is destroyed.
> 
> It's bad practice for a function to DECREF its arguments unless the 
> function's sole purpose is cleanup because the function won't know where 
> the arguments came from.
> 

I'm finding it out now. What strikes me was how hard it was to debug 
this. I think it was caused because I INCREFed the return object. I 
guess I did that to workaround the wrong DECREF data in the return 
object. However that caused a hell to debug. I'm really curious what the 
best practices are for debugging embedded CPython.

Thanks big time for your feedback!


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