[Pythonmac-SIG] package manager.

[Kim Branson]

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HI all,

this is probably a question that has been answered on the wiki, but i  
can't seem to find it.
I decided to try and upgrade my version of Numeric (currently 23.1)  
(building the latest Biopython was causing errors) but the  
packagmanager gives me a 404 errror  opening  
http://www.python.org/packman/version-0.3/darwin-7.80- 
Power_Macintosh.plist.

I've tried the official unofficial database, but when i attempt to  
upgrade numeric I get told that there is no package for apple installed  
python 2.3 download manually.  I thought all macpython used apples  
python now?

ealier in the night i tried to install a few packages, like reportlab,  
and the packager appeared to die half way through. I was letting me  
download packages, but have i corrupted its database?

Can i repair this, or should I attempt to build all these packages by  
hand. If so can anyone resolve the errors in building i have below?

cheers

Kim


Building numeric 23.7 from the source dies,
building 'lapack_lite' extension
gcc -Wl,-F. -Wl,-F. -bundle -framework Python  
build/temp.darwin-7.8.0-Power_Macintosh-2.3/Src/lapack_litemodule.o  
- -L/usr/lib/atlas -llapack -lcblas -lf77blas -latlas -lg2c -o  
build/lib.darwin-7.8.0-Power_Macintosh-2.3/lapack_lite.so -framework  
vecLib
ld: warning -L: directory name (/usr/lib/atlas) does not exist
ld: can't locate file for: -llapack
error: command 'gcc' failed with exit status 1


Building Biopython1.40b
fails with
Bio/Cluster/clustermodule.c:2:33: Numeric/arrayobject.h: No such file  
or directory
Bio/Cluster/clustermodule.c:20: error: parse error before  
"PyArrayObject"




Bio/Cluster/clustermodule.c:2:33: Numeric/arrayobject.h: No such file  
or directory
Bio/Cluster/clustermodule.c:20: error: parse error before  
"PyArrayObject"



Dr Kim Branson
Peter Doherty Fellow
Protein Structure and Function
St Vincents Institute for Medical Research
41 Victoria Parade, Fitzroy
Victoria 3065, Australia.
Phone: +613 9288 2480
Fax: +613 94162 676
Ph +613 9662 7136
kbranson at svi.edu.au
kim.branson at gmail.com
www.svi.edu.au
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