Greyscale reconstruction and merging CellProfiler code
Stéfan van der Walt
stefan at sun.ac.za
Sun Jul 10 17:38:50 EDT 2011
On Thu, Jul 7, 2011 at 6:30 PM, Tony Yu <tsyu80 at gmail.com> wrote:
> I added a reference and tried to expand on the description, but the
> description is still poor. Even in the papers I've read, the descriptions
> are quite difficult for me to understand (the figures in those papers really
> help). I've also added an example to the docstring, but it's quite ...
> verbose.
I guess the question then becomes whether such a specialised algorithm
is of enough common interest to include it. In the end, every piece
of code requires maintenance, and our aim is to provide a fairly
generic set of tools that can be used to construct image processing
experiments.
I don't know this algorithm specifically, so I can't say, but it is an
aspect worth considering.
> I'd like to add a longer example in the docs, but that will have to wait
> until I have a bit more time. When I do add it, where should put it? I'd
> like for it to be more like a tutorial than a function-specific example
> (specifically, I'd like to compare reconstruction and top-hat for peak
> detection).
We are eagerly awaiting tutorial contributions for the docs, but no
one's volunteered so far :) I'd love to have more of these, as it
shows common patterns (such as how to use io, displaying images,
etc.).
Regards
Stéfan
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