Segmentation and Granulometry with scikit-image

[Tony Yu]

On Sun, Dec 16, 2012 at 10:41 AM, Dan <dkin at walla.co.il> wrote:

> Hi,
>
> I installed Windows binaries (kindly provided by Christoph Gohlke)- file
> name:scikit-image-0.7.2.win32-py2.7.exe
>
> Thanks
>
> El domingo, 16 de diciembre de 2012 10:36:13 UTC-5, Dan escribió:
>
>> Hi,
>>
>> The output:
>> Python 2.7.3 (default, Apr 10 2012, 23:31:26) [MSC v.1500 32 bit (Intel)]
>> on win32
>> Type "copyright", "credits" or "license()" for more information.
>> >>> import skimage
>> >>> print skimage.__version__
>> 0.7.2
>> >>> print skimage.__file__
>> C:\Python27\lib\site-packages\**skimage\__init__.pyc
>> >>>
>>
>> Thanks
>>
>

Hmm... that all looks good to me.

Maybe something went wrong during the install? This is bizarre, because
`_skeletonize` is a regular python file (not cython, so it's not a build
issue). If you look in

"C:\Python27\lib\site-**packages\skimage\morphology\"


is there a "_skeletonize.py" and does it like the
original<https://github.com/scikit-image/scikit-image/blob/v0.7.2/skimage/morphology/_skeletonize.py>
(i.e.
does it have a `skeletonize` function)?

-Tony


>> El domingo, 16 de diciembre de 2012 09:41:35 UTC-5, Tony S Yu escribió:
>>>
>>> On Sat, Dec 15, 2012 at 6:45 PM, Dan <dk... at walla.co.il> wrote:
>>>
>>>> Hi,
>>>>
>>>> Thanks for the rapid respnse, I am using 0.7.2 on windows.
>>>>
>>>> The error is now:
>>>>
>>>>  Traceback (most recent call last):
>>>>   File "C:/Users/DK/PProjects/**skimage_seg/scikit_seg.py", line 3, in
>>>> <module>
>>>>     import skimage.morphology as morph
>>>>   File "C:\Python27\lib\site-**packages\skimage\morphology\__**init__.py",
>>>> line 7, in <module>
>>>>     from ._skeletonize import skeletonize, medial_axis
>>>> ImportError: cannot import name skeletonize
>>>>
>>>> Any idea why?.
>>>>
>>>> Thanks
>>>>
>>>
>>>
>>> Hi Dan,
>>>
>>> How did you install scikit-image? Also, what's the output of the
>>> following?
>>>
>>>
>>> import skimage
>>> print skimage.__version__
>>> print skimage.__file__
>>>
>>>
>>> -Tony
>>>
>>>
>>>
>>>> El sábado, 15 de diciembre de 2012 16:24:31 UTC-5, Tony S Yu escribió:
>>>>
>>>>> On Sat, Dec 15, 2012 at 1:58 PM, Dan <dk... at walla.co.il> wrote:
>>>>>
>>>>>> Dear Tony,
>>>>>>
>>>>>> Thanks for the script.
>>>>>>
>>>>>> I was running the script and I got this error:
>>>>>> Traceback (most recent call last):
>>>>>>   File "C:/Users/DK/PProjects/**skimage**_seg/scikit_seg.py", line
>>>>>> 18, in <module>
>>>>>>     img_background = morph.reconstruction(img-h, img)
>>>>>> AttributeError: 'module' object has no attribute 'reconstruction'
>>>>>>
>>>>>> Process finished with exit code 1
>>>>>>
>>>>>> Any reason why?
>>>>>>
>>>>>> Thanks a lot,
>>>>>> Dan
>>>>>>
>>>>>
>>>>> Hi Dan,
>>>>>
>>>>> Which version of scikit-image are you running? You'll need at least
>>>>> 0.7 (the latest stable release). You can check the version with the
>>>>> following shell command:
>>>>>
>>>>>     $ python -c "import skimage; print skimage.__version__"
>>>>>
>>>>> -Tony
>>>>>
>>>>  --
>
>
>
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