Equivalent of watershed for cutting connected components of an image of particles?
Juan Nunez-Iglesias
jni.soma at gmail.com
Thu Feb 19 05:12:24 EST 2015
Ha! I'd never noticed that function! Thanks for pointing it out, Georges! =)
On Thu, Feb 19, 2015 at 7:31 PM, Georges H <georgeshattab at gmail.com>
wrote:
> I second the post of Juan regarding the watershed for non sparse data.
> As for clearing image borders you have a function from the segmentation
> module here :
> http://scikit-image.org/docs/dev/api/skimage.segmentation.html#clear-border
> On Thursday, 19 February 2015 01:04:10 UTC+1, Adam Hughes wrote:
>>
>> Hi,
>>
>> In ImageJ, one can select watershedding to break up connected regions of
>> particles. Are there any examples of using watershed in this capacity in
>> scikit image? All of the examples I see seem to use watershedding to do
>> segmentation, not to break connected particles in an already-segmented
>> black and white image.
>>
>> Also, is there a straightforward way to remove particles on a the edge of
>> an image? Sorry, googling is failing me, but I know this is possible.
>>
>> Thanks
>>
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