[scikit-learn] ANN: DIPY 1.1.1 - a powerful release

Eleftherios Garyfallidis garyfallidis at gmail.com
Wed Jan 15 13:12:32 EST 2020


We are excited to announce a new release of DIPY:


DIPY 1.1.1 is out! In addition:


a) A new 5 day workshop available during March 16-20 to learn the theory
and applications of the hundreds of methods available in DIPY 1.1.1
Intense!

See the exquisite program here <https://workshop.dipy.org>.

*b) Given the need for a myriad of new DIPY derivative projects, DIPY moved
to its own organization in GitHub. **Long live DIPY! *
*And therefore, *https://github.com/dipy/dipy* supersedes
https://github.com/nipy/dipy
<https://github.com/nipy/dipy> The old link will be available as a redirect
link for the next 6 months.*

c) Please support us by *citing** DIPY* in your papers using the following
DOI: 10.3389/fninf.2014.00008
<https://www.ncbi.nlm.nih.gov/pubmed/24600385>otherwise
the DIPY citation police will find you. ;)

DIPY 1.1.1 (Friday, 10 January 2020)

This release received contributions from 11 developers (the full release
notes are at:
https://dipy.org/documentation/1.1.1./release_notes/release1.1/). Thank you
all for your contributions and feedback!

Please click here <https://dipy.org/documentation/1.1.1./api_changes/> to
check API changes.

Highlights of this release include:

   -

   New module for deep learning DIPY.NN (uses TensorFlow 2.0).
   -

   Improved DKI performance and increased utilities.
   -

   Non-linear and RESTORE fits from DTI compatible now with DKI.
   -

   Numerical solutions for estimating axial, radial and mean kurtosis.
   -

   Added Kurtosis Fractional Anisotropy by Glenn et al. 2015.
   -

   Added Mean Kurtosis Tensor by Hansen et al. 2013.
   -

   Nibabel minimum version is 3.0.0.
   -

   Azure CI added and Appveyor CI removed.
   -

   New command line interfaces for LPCA, MPPCA and Gibbs Unringing.
   -

   New MTMS CSD tutorial added.
   -

   Horizon refactored and updated to support StatefulTractograms.
   -

   Speeded up all cython modules by using a smarter configuration setting.
   -

   All tutorials updated to API changes and 2 new tutorials added.
   -

   Large documentation update.
   -

   Closed 126 issues and merged 50 pull requests.

Note:

   -

   Have in mind that DIPY stopped supporting Python 2 after version 0.16.0.
   All major Python projects have switched to Python 3. It is time that you
   switch too.



To upgrade or install <http://dipy.org/release0.10.html> DIPY

Run the following command in your terminal:
<http://dipy.org/release0.10.html>

pip install --upgrade dipy

or

conda install -c conda-forge dipy

This version of DIPY depends on nibabel (3.0.0+).

For visualization you need FURY (0.4.0+).

Questions or suggestions?



For any questions go to http://dipy.org, or send an e-mail to
dipy at python.org <neuroimaging at python.org>

We also have an instant messaging service and chat room available at
https://gitter.im/nipy/dipy

On behalf of the DIPY developers,

Eleftherios Garyfallidis, Ariel Rokem, Serge Koudoro

https://dipy.org/contributors
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