[SciPy-Dev] ANN: Scipy 0.16.0 release

Ralf Gommers ralf.gommers at gmail.com
Fri Jul 24 15:39:54 EDT 2015 

Hi all,

On behalf of the Scipy development team I'm pleased to announce the
availability of Scipy 0.16.0. This release contains some exciting new
features (see release notes below) and more than half a years' worth of
maintenance work. 93 people contributed to this release.

This release requires Python 2.6, 2.7 or 3.2-3.4 and NumPy 1.6.2 or
greater. Sources, binaries and release notes can be found at
https://github.com/scipy/scipy/releases/tag/v0.16.0


Enjoy,
Ralf




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==========================
SciPy 0.16.0 Release Notes
==========================

SciPy 0.16.0 is the culmination of 7 months of hard work. It contains
many new features, numerous bug-fixes, improved test coverage and
better documentation.  There have been a number of deprecations and
API changes in this release, which are documented below.  All users
are encouraged to upgrade to this release, as there are a large number
of bug-fixes and optimizations.  Moreover, our development attention
will now shift to bug-fix releases on the 0.16.x branch, and on adding
new features on the master branch.

This release requires Python 2.6, 2.7 or 3.2-3.4 and NumPy 1.6.2 or greater.

Highlights of this release include:

- - A Cython API for BLAS/LAPACK in `scipy.linalg`
- - A new benchmark suite.  It's now straightforward to add new benchmarks,
and
  they're routinely included with performance enhancement PRs.
- - Support for the second order sections (SOS) format in `scipy.signal`.


New features
============

Benchmark suite
- ---------------

The benchmark suite has switched to using `Airspeed Velocity
<http://spacetelescope.github.io/asv/>`__ for benchmarking. You can
run the suite locally via ``python runtests.py --bench``. For more
details, see ``benchmarks/README.rst``.

`scipy.linalg` improvements
- ---------------------------

A full set of Cython wrappers for BLAS and LAPACK has been added in the
modules `scipy.linalg.cython_blas` and `scipy.linalg.cython_lapack`.
In Cython, these wrappers can now be cimported from their corresponding
modules and used without linking directly against BLAS or LAPACK.

The functions `scipy.linalg.qr_delete`, `scipy.linalg.qr_insert` and
`scipy.linalg.qr_update` for updating QR decompositions were added.

The function `scipy.linalg.solve_circulant` solves a linear system with
a circulant coefficient matrix.

The function `scipy.linalg.invpascal` computes the inverse of a Pascal
matrix.

The function `scipy.linalg.solve_toeplitz`, a Levinson-Durbin Toeplitz
solver,
was added.

Added wrapper for potentially useful LAPACK function ``*lasd4``.  It
computes
the square root of the i-th updated eigenvalue of a positive symmetric
rank-one
modification to a positive diagonal matrix. See its LAPACK documentation and
unit tests for it to get more info.

Added two extra wrappers for LAPACK least-square solvers. Namely, they are
``*gelsd`` and ``*gelsy``.

Wrappers for the LAPACK ``*lange`` functions, which calculate various matrix
norms, were added.

Wrappers for ``*gtsv`` and ``*ptsv``, which solve ``A*X = B`` for
tri-diagonal
matrix ``A``, were added.

`scipy.signal` improvements
- ---------------------------

Support for second order sections (SOS) as a format for IIR filters
was added.  The new functions are:

* `scipy.signal.sosfilt`
* `scipy.signal.sosfilt_zi`,
* `scipy.signal.sos2tf`
* `scipy.signal.sos2zpk`
* `scipy.signal.tf2sos`
* `scipy.signal.zpk2sos`.

Additionally, the filter design functions `iirdesign`, `iirfilter`,
`butter`,
`cheby1`, `cheby2`, `ellip`, and `bessel` can return the filter in the SOS
format.

The function `scipy.signal.place_poles`, which provides two methods to place
poles for linear systems, was added.

The option to use Gustafsson's method for choosing the initial conditions
of the forward and backward passes was added to `scipy.signal.filtfilt`.

New classes ``TransferFunction``, ``StateSpace`` and ``ZerosPolesGain`` were
added.  These classes are now returned when instantiating
`scipy.signal.lti`.
Conversion between those classes can be done explicitly now.

An exponential (Poisson) window was added as `scipy.signal.exponential`,
and a
Tukey window was added as `scipy.signal.tukey`.

The function for computing digital filter group delay was added as
`scipy.signal.group_delay`.

The functionality for spectral analysis and spectral density estimation has
been significantly improved: `scipy.signal.welch` became ~8x faster and the
functions `scipy.signal.spectrogram`, `scipy.signal.coherence` and
`scipy.signal.csd` (cross-spectral density) were added.

`scipy.signal.lsim` was rewritten - all known issues are fixed, so this
function can now be used instead of ``lsim2``; ``lsim`` is orders of
magnitude
faster than ``lsim2`` in most cases.

`scipy.sparse` improvements
- ---------------------------

The function `scipy.sparse.norm`, which computes sparse matrix norms, was
added.

The function `scipy.sparse.random`, which allows to draw random variates
from
an arbitrary distribution, was added.

`scipy.spatial` improvements
- ----------------------------

`scipy.spatial.cKDTree` has seen a major rewrite, which improved the
performance of the ``query`` method significantly, added support for
parallel
queries, pickling, and options that affect the tree layout.  See pull
request
4374 for more details.

The function `scipy.spatial.procrustes` for Procrustes analysis (statistical
shape analysis) was added.

`scipy.stats` improvements
- --------------------------

The Wishart distribution and its inverse have been added, as
`scipy.stats.wishart` and `scipy.stats.invwishart`.

The Exponentially Modified Normal distribution has been
added as `scipy.stats.exponnorm`.

The Generalized Normal distribution has been added as `scipy.stats.gennorm`.

All distributions now contain a ``random_state`` property and allow
specifying a
specific ``numpy.random.RandomState`` random number generator when
generating
random variates.

Many statistical tests and other `scipy.stats` functions that have multiple
return values now return ``namedtuples``.  See pull request 4709 for
details.

`scipy.optimize` improvements
- -----------------------------

A new derivative-free method DF-SANE has been added to the nonlinear
equation
system solving function `scipy.optimize.root`.


Deprecated features
===================

``scipy.stats.pdf_fromgamma`` is deprecated.  This function was
undocumented,
untested and rarely used.  Statsmodels provides equivalent functionality
with ``statsmodels.distributions.ExpandedNormal``.

``scipy.stats.fastsort`` is deprecated.  This function is unnecessary,
``numpy.argsort`` can be used instead.

``scipy.stats.signaltonoise`` and ``scipy.stats.mstats.signaltonoise`` are
deprecated.  These functions did not belong in ``scipy.stats`` and are
rarely
used.  See issue #609 for details.

``scipy.stats.histogram2`` is deprecated. This function is unnecessary,
``numpy.histogram2d`` can be used instead.

Backwards incompatible changes
==============================

The deprecated global optimizer ``scipy.optimize.anneal`` was removed.

The following deprecated modules have been removed: ``scipy.lib.blas``,
``scipy.lib.lapack``, ``scipy.linalg.cblas``, ``scipy.linalg.fblas``,
``scipy.linalg.clapack``, ``scipy.linalg.flapack``.  They had been
deprecated
since Scipy 0.12.0, the functionality should be accessed as
`scipy.linalg.blas`
and `scipy.linalg.lapack`.

The deprecated function ``scipy.special.all_mat`` has been removed.

The deprecated functions ``fprob``, ``ksprob``, ``zprob``, ``randwcdf``
and ``randwppf`` have been removed from `scipy.stats`.


Other changes
=============

The version numbering for development builds has been updated to comply
with PEP 440.

Building with ``python setup.py develop`` is now supported.


Authors
=======

* @axiru +
* @endolith
* Elliott Sales de Andrade +
* Anne Archibald
* Yoshiki Vázquez Baeza +
* Sylvain Bellemare
* Felix Berkenkamp +
* Raoul Bourquin +
* Matthew Brett
* Per Brodtkorb
* Christian Brueffer
* Lars Buitinck
* Evgeni Burovski
* Steven Byrnes
* CJ Carey
* George Castillo +
* Alex Conley +
* Liam Damewood +
* Rupak Das +
* Abraham Escalante +
* Matthias Feurer +
* Eric Firing +
* Clark Fitzgerald
* Chad Fulton
* André Gaul
* Andreea Georgescu +
* Christoph Gohlke
* Andrey Golovizin +
* Ralf Gommers
* J.J. Green +
* Alex Griffing
* Alexander Grigorievskiy +
* Hans Moritz Gunther +
* Jonas Hahnfeld +
* Charles Harris
* Ian Henriksen
* Andreas Hilboll
* Åsmund Hjulstad +
* Jan Schlüter +
* Janko Slavič +
* Daniel Jensen +
* Johannes Ballé +
* Terry Jones +
* Amato Kasahara +
* Eric Larson
* Denis Laxalde
* Antony Lee
* Gregory R. Lee
* Perry Lee +
* Loïc Estève
* Martin Manns +
* Eric Martin +
* Matěj Kocián +
* Andreas Mayer +
* Nikolay Mayorov +
* Robert McGibbon +
* Sturla Molden
* Nicola Montecchio +
* Eric Moore
* Jamie Morton +
* Nikolas Moya +
* Maniteja Nandana +
* Andrew Nelson
* Joel Nothman
* Aldrian Obaja
* Regina Ongowarsito +
* Paul Ortyl +
* Pedro López-Adeva Fernández-Layos +
* Stefan Peterson +
* Irvin Probst +
* Eric Quintero +
* John David Reaver +
* Juha Remes +
* Thomas Robitaille
* Clancy Rowley +
* Tobias Schmidt +
* Skipper Seabold
* Aman Singh +
* Eric Soroos
* Valentine Svensson +
* Julian Taylor
* Aman Thakral +
* Helmut Toplitzer +
* Fukumu Tsutsumi +
* Anastasiia Tsyplia +
* Jacob Vanderplas
* Pauli Virtanen
* Matteo Visconti +
* Warren Weckesser
* Florian Wilhelm +
* Nathan Woods
* Haochen Wu +
* Daan Wynen +

A total of 93 people contributed to this release.
People with a "+" by their names contributed a patch for the first time.
This list of names is automatically generated, and may not be fully
complete.


Issues closed for 0.16.0
- ------------------------

- - `#1063 <https://github.com/scipy/scipy/issues/1063>`__: Implement a
whishart distribution (Trac #536)
- - `#1885 <https://github.com/scipy/scipy/issues/1885>`__: Rbf: floating
point warnings - possible bug (Trac #1360)
- - `#2020 <https://github.com/scipy/scipy/issues/2020>`__: Rbf default
epsilon too large (Trac #1495)
- - `#2325 <https://github.com/scipy/scipy/issues/2325>`__: extending
distributions, hypergeom, to degenerate cases (Trac...
- - `#3502 <https://github.com/scipy/scipy/issues/3502>`__: [ENH]
linalg.hessenberg should use ORGHR for calc_q=True
- - `#3603 <https://github.com/scipy/scipy/issues/3603>`__: Passing array
as window into signal.resample() fails
- - `#3675 <https://github.com/scipy/scipy/issues/3675>`__: Intermittent
failures for signal.slepian on Windows
- - `#3742 <https://github.com/scipy/scipy/issues/3742>`__:
Pchipinterpolator inconvenient as ppoly
- - `#3786 <https://github.com/scipy/scipy/issues/3786>`__: add procrustes?
- - `#3798 <https://github.com/scipy/scipy/issues/3798>`__:
scipy.io.savemat fails for empty dicts
- - `#3975 <https://github.com/scipy/scipy/issues/3975>`__: Use RandomState
in scipy.stats
- - `#4022 <https://github.com/scipy/scipy/issues/4022>`__: savemat
incorrectly saves logical arrays
- - `#4028 <https://github.com/scipy/scipy/issues/4028>`__:
scipy.stats.geom.logpmf(1,1) returns nan. The correct value is...
- - `#4030 <https://github.com/scipy/scipy/issues/4030>`__: simplify
scipy.stats.betaprime.cdf
- - `#4031 <https://github.com/scipy/scipy/issues/4031>`__: improve
accuracy of scipy.stats.gompertz distribution for small...
- - `#4033 <https://github.com/scipy/scipy/issues/4033>`__: improve
accuracy of scipy.stats.lomax distribution for small...
- - `#4034 <https://github.com/scipy/scipy/issues/4034>`__: improve
accuracy of scipy.stats.rayleigh distribution for large...
- - `#4035 <https://github.com/scipy/scipy/issues/4035>`__: improve
accuracy of scipy.stats.truncexpon distribution for small...
- - `#4081 <https://github.com/scipy/scipy/issues/4081>`__: Error when
reading matlab file: buffer is too small for requested...
- - `#4100 <https://github.com/scipy/scipy/issues/4100>`__: Why does qr(a,
lwork=0) not fail?
- - `#4134 <https://github.com/scipy/scipy/issues/4134>`__: scipy.stats:
rv_frozen has no expect() method
- - `#4204 <https://github.com/scipy/scipy/issues/4204>`__: Please add
docstring to scipy.optimize.RootResults
- - `#4206 <https://github.com/scipy/scipy/issues/4206>`__: Wrap LAPACK
tridiagonal solve routine `gtsv`
- - `#4208 <https://github.com/scipy/scipy/issues/4208>`__: Empty sparse
matrices written to MAT file cannot be read by MATLAB
- - `#4217 <https://github.com/scipy/scipy/issues/4217>`__: use a TravisCI
configuration with numpy built with NPY_RELAXED_STRIDES_CHECKING=1
- - `#4282 <https://github.com/scipy/scipy/issues/4282>`__:
integrate.odeint raises an exception when full_output=1 and the...
- - `#4301 <https://github.com/scipy/scipy/issues/4301>`__: scipy and numpy
version names do not follow pep 440
- - `#4355 <https://github.com/scipy/scipy/issues/4355>`__:
PPoly.antiderivative() produces incorrect output
- - `#4391 <https://github.com/scipy/scipy/issues/4391>`__: spsolve becomes
extremely slow with large b matrix
- - `#4393 <https://github.com/scipy/scipy/issues/4393>`__: Documentation
glitsch in sparse.linalg.spilu
- - `#4408 <https://github.com/scipy/scipy/issues/4408>`__: Vector-valued
constraints in minimize() et al
- - `#4412 <https://github.com/scipy/scipy/issues/4412>`__: Documentation
of scipy.signal.cwt error
- - `#4428 <https://github.com/scipy/scipy/issues/4428>`__: dok.__setitem__
problem with negative indices
- - `#4434 <https://github.com/scipy/scipy/issues/4434>`__: Incomplete
documentation for sparse.linalg.spsolve
- - `#4438 <https://github.com/scipy/scipy/issues/4438>`__: linprog()
documentation example wrong
- - `#4445 <https://github.com/scipy/scipy/issues/4445>`__: Typo in
scipy.special.expit doc
- - `#4467 <https://github.com/scipy/scipy/issues/4467>`__: Documentation
Error in scipy.optimize options for TNC
- - `#4492 <https://github.com/scipy/scipy/issues/4492>`__: solve_toeplitz
benchmark is bitrotting already
- - `#4506 <https://github.com/scipy/scipy/issues/4506>`__: lobpcg/sparse
performance regression Jun 2014?
- - `#4520 <https://github.com/scipy/scipy/issues/4520>`__:
g77_abi_wrappers needed on Linux for MKL as well
- - `#4521 <https://github.com/scipy/scipy/issues/4521>`__: Broken check in
uses_mkl for newer versions of the library
- - `#4523 <https://github.com/scipy/scipy/issues/4523>`__: rbf with
gaussian kernel seems to produce more noise than original...
- - `#4526 <https://github.com/scipy/scipy/issues/4526>`__: error in site
documentation for poisson.pmf() method
- - `#4527 <https://github.com/scipy/scipy/issues/4527>`__: KDTree example
doesn't work in Python 3
- - `#4550 <https://github.com/scipy/scipy/issues/4550>`__:
`scipy.stats.mode` - UnboundLocalError on empty sequence
- - `#4554 <https://github.com/scipy/scipy/issues/4554>`__: filter out
convergence warnings in optimization tests
- - `#4565 <https://github.com/scipy/scipy/issues/4565>`__: odeint messages
- - `#4569 <https://github.com/scipy/scipy/issues/4569>`__: remez:
"ValueError: Failure to converge after 25 iterations....
- - `#4582 <https://github.com/scipy/scipy/issues/4582>`__: DOC: optimize:
_minimize_scalar_brent does not have a disp option
- - `#4585 <https://github.com/scipy/scipy/issues/4585>`__: DOC: Erroneous
latex-related characters in tutorial.
- - `#4590 <https://github.com/scipy/scipy/issues/4590>`__:
sparse.linalg.svds should throw an exception if which not in...
- - `#4594 <https://github.com/scipy/scipy/issues/4594>`__:
scipy.optimize.linprog IndexError when a callback is providen
- - `#4596 <https://github.com/scipy/scipy/issues/4596>`__:
scipy.linalg.block_diag misbehavior with empty array inputs (v0.13.3)
- - `#4599 <https://github.com/scipy/scipy/issues/4599>`__:
scipy.integrate.nquad should call _OptFunc when called with only...
- - `#4612 <https://github.com/scipy/scipy/issues/4612>`__: Crash in
signal.lfilter on nd input with wrong shaped zi
- - `#4613 <https://github.com/scipy/scipy/issues/4613>`__:
scipy.io.readsav error on reading sav file
- - `#4673 <https://github.com/scipy/scipy/issues/4673>`__:
scipy.interpolate.RectBivariateSpline construction locks PyQt...
- - `#4681 <https://github.com/scipy/scipy/issues/4681>`__: Broadcasting in
signal.lfilter still not quite right.
- - `#4705 <https://github.com/scipy/scipy/issues/4705>`__: kmeans
k_or_guess parameter error if guess is not square array
- - `#4719 <https://github.com/scipy/scipy/issues/4719>`__: Build failure
on 14.04.2
- - `#4724 <https://github.com/scipy/scipy/issues/4724>`__: GenGamma _munp
function fails due to overflow
- - `#4726 <https://github.com/scipy/scipy/issues/4726>`__: FAIL:
test_cobyla.test_vector_constraints
- - `#4734 <https://github.com/scipy/scipy/issues/4734>`__: Failing tests
in stats with numpy master.
- - `#4736 <https://github.com/scipy/scipy/issues/4736>`__: qr_update bug
or incompatibility with numpy 1.10?
- - `#4746 <https://github.com/scipy/scipy/issues/4746>`__: linprog returns
solution violating equality constraint
- - `#4757 <https://github.com/scipy/scipy/issues/4757>`__:
optimize.leastsq docstring mismatch
- - `#4774 <https://github.com/scipy/scipy/issues/4774>`__: Update
contributor list for v0.16
- - `#4779 <https://github.com/scipy/scipy/issues/4779>`__: circmean and
others do not appear in the documentation
- - `#4788 <https://github.com/scipy/scipy/issues/4788>`__: problems with
scipy sparse linalg isolve iterative.py when complex
- - `#4791 <https://github.com/scipy/scipy/issues/4791>`__: BUG:
scipy.spatial: incremental Voronoi doesn't increase size...


Pull requests for 0.16.0
- ------------------------

- - `#3116 <https://github.com/scipy/scipy/pull/3116>`__: sparse:
enhancements for DIA format
- - `#3157 <https://github.com/scipy/scipy/pull/3157>`__: ENH: linalg: add
the function 'solve_circulant' for solving a...
- - `#3442 <https://github.com/scipy/scipy/pull/3442>`__: ENH: signal: Add
Gustafsson's method as an option for the filtfilt...
- - `#3679 <https://github.com/scipy/scipy/pull/3679>`__: WIP: fix sporadic
slepian failures
- - `#3680 <https://github.com/scipy/scipy/pull/3680>`__: Some cleanups in
stats
- - `#3717 <https://github.com/scipy/scipy/pull/3717>`__: ENH: Add
second-order sections filtering
- - `#3741 <https://github.com/scipy/scipy/pull/3741>`__: Dltisys changes
- - `#3956 <https://github.com/scipy/scipy/pull/3956>`__: add note to
scipy.signal.resample about prime sample numbers
- - `#3980 <https://github.com/scipy/scipy/pull/3980>`__: Add check_finite
flag to UnivariateSpline
- - `#3996 <https://github.com/scipy/scipy/pull/3996>`__: MAINT: stricter
linalg argument checking
- - `#4001 <https://github.com/scipy/scipy/pull/4001>`__: BUG: numerical
precision in dirichlet
- - `#4012 <https://github.com/scipy/scipy/pull/4012>`__: ENH: linalg: Add
a function to compute the inverse of a Pascal...
- - `#4021 <https://github.com/scipy/scipy/pull/4021>`__: ENH: Cython api
for lapack and blas
- - `#4089 <https://github.com/scipy/scipy/pull/4089>`__: Fixes for various
PEP8 issues.
- - `#4116 <https://github.com/scipy/scipy/pull/4116>`__: MAINT: fitpack:
trim down compiler warnings (unused labels, variables)
- - `#4129 <https://github.com/scipy/scipy/pull/4129>`__: ENH: stats: add a
random_state property to distributions
- - `#4135 <https://github.com/scipy/scipy/pull/4135>`__: ENH: Add Wishart
and inverse Wishart distributions
- - `#4195 <https://github.com/scipy/scipy/pull/4195>`__: improve the
interpolate docs
- - `#4200 <https://github.com/scipy/scipy/pull/4200>`__: ENH: Add t-test
from descriptive stats function.
- - `#4202 <https://github.com/scipy/scipy/pull/4202>`__: Dendrogram
threshold color
- - `#4205 <https://github.com/scipy/scipy/pull/4205>`__: BLD: fix a number
of Bento build warnings.
- - `#4211 <https://github.com/scipy/scipy/pull/4211>`__: add an ufunc for
the inverse Box-Cox transfrom
- - `#4212 <https://github.com/scipy/scipy/pull/4212>`__: MRG:fix for
gh-4208
- - `#4213 <https://github.com/scipy/scipy/pull/4213>`__: ENH: specific
warning if matlab file is empty
- - `#4215 <https://github.com/scipy/scipy/pull/4215>`__: Issue #4209:
splprep documentation updated to reflect dimensional...
- - `#4219 <https://github.com/scipy/scipy/pull/4219>`__: DOC: silence
several Sphinx warnings when building the docs
- - `#4223 <https://github.com/scipy/scipy/pull/4223>`__: MAINT: remove two
redundant lines of code
- - `#4226 <https://github.com/scipy/scipy/pull/4226>`__: try forcing the
numpy rebuild with relaxed strides
- - `#4228 <https://github.com/scipy/scipy/pull/4228>`__: BLD: some updates
to Bento config files and docs. Closes gh-3978.
- - `#4232 <https://github.com/scipy/scipy/pull/4232>`__: wrong references
in the docs
- - `#4242 <https://github.com/scipy/scipy/pull/4242>`__: DOC: change
example sample spacing
- - `#4245 <https://github.com/scipy/scipy/pull/4245>`__: Arff fixes
- - `#4246 <https://github.com/scipy/scipy/pull/4246>`__: MAINT: C fixes
- - `#4247 <https://github.com/scipy/scipy/pull/4247>`__: MAINT: remove
some unused code
- - `#4249 <https://github.com/scipy/scipy/pull/4249>`__: Add routines for
updating QR decompositions
- - `#4250 <https://github.com/scipy/scipy/pull/4250>`__: MAINT: Some
pyflakes-driven cleanup in linalg and sparse
- - `#4252 <https://github.com/scipy/scipy/pull/4252>`__: MAINT trim away
>10 kLOC of generated C code
- - `#4253 <https://github.com/scipy/scipy/pull/4253>`__: TST: stop
shadowing ellip* tests vs boost data
- - `#4254 <https://github.com/scipy/scipy/pull/4254>`__: MAINT: special:
use NPY_PI, not M_PI
- - `#4255 <https://github.com/scipy/scipy/pull/4255>`__: DOC: INSTALL: use
Py3-compatible print syntax, and don't mention...
- - `#4256 <https://github.com/scipy/scipy/pull/4256>`__: ENH: spatial:
reimplement cdist_cosine using np.dot
- - `#4258 <https://github.com/scipy/scipy/pull/4258>`__: BUG: io.arff
#4429 #2088
- - `#4261 <https://github.com/scipy/scipy/pull/4261>`__: MAINT: signal:
PEP8 and related style clean up.
- - `#4262 <https://github.com/scipy/scipy/pull/4262>`__: BUG:
newton_krylov() was ignoring norm_tol argument, closes #4259
- - `#4263 <https://github.com/scipy/scipy/pull/4263>`__: MAINT: clean up
test noise and optimize tests for docstrings...
- - `#4266 <https://github.com/scipy/scipy/pull/4266>`__: MAINT: io: Give
an informative error when attempting to read...
- - `#4268 <https://github.com/scipy/scipy/pull/4268>`__: MAINT: fftpack
benchmark integer division vs true division
- - `#4269 <https://github.com/scipy/scipy/pull/4269>`__: MAINT: avoid
shadowing the eigvals function
- - `#4272 <https://github.com/scipy/scipy/pull/4272>`__: BUG: sparse: Fix
bench_sparse.py
- - `#4276 <https://github.com/scipy/scipy/pull/4276>`__: DOC: remove
confusing parts of the documentation related to writing...
- - `#4281 <https://github.com/scipy/scipy/pull/4281>`__: Sparse matrix
multiplication: only convert array if needed (with...
- - `#4284 <https://github.com/scipy/scipy/pull/4284>`__: BUG: integrate:
odeint crashed when the integration time was...
- - `#4286 <https://github.com/scipy/scipy/pull/4286>`__: MRG: fix matlab
output type of logical array
- - `#4287 <https://github.com/scipy/scipy/pull/4287>`__: DEP: deprecate
stats.pdf_fromgamma. Closes gh-699.
- - `#4291 <https://github.com/scipy/scipy/pull/4291>`__: DOC: linalg: fix
layout in cholesky_banded docstring
- - `#4292 <https://github.com/scipy/scipy/pull/4292>`__: BUG: allow empty
dict as proxy for empty struct
- - `#4293 <https://github.com/scipy/scipy/pull/4293>`__: MAINT: != ->
not_equal in hamming distance implementation
- - `#4295 <https://github.com/scipy/scipy/pull/4295>`__: Pole placement
- - `#4296 <https://github.com/scipy/scipy/pull/4296>`__: MAINT: some
cleanups in tests of several modules
- - `#4302 <https://github.com/scipy/scipy/pull/4302>`__: ENH: Solve
toeplitz linear systems
- - `#4306 <https://github.com/scipy/scipy/pull/4306>`__: Add benchmark for
conjugate gradient solver.
- - `#4307 <https://github.com/scipy/scipy/pull/4307>`__: BLD: PEP 440
- - `#4310 <https://github.com/scipy/scipy/pull/4310>`__: BUG: make
stats.geom.logpmf(1,1) return 0.0 instead of nan
- - `#4311 <https://github.com/scipy/scipy/pull/4311>`__: TST: restore a
test that uses slogdet now that we have dropped...
- - `#4313 <https://github.com/scipy/scipy/pull/4313>`__: Some minor fixes
for stats.wishart addition.
- - `#4315 <https://github.com/scipy/scipy/pull/4315>`__: MAINT: drop numpy
1.5 compatibility code in sparse matrix tests
- - `#4318 <https://github.com/scipy/scipy/pull/4318>`__: ENH: Add
random_state to multivariate distributions
- - `#4319 <https://github.com/scipy/scipy/pull/4319>`__: MAINT: fix
hamming distance regression for exotic arrays, with...
- - `#4320 <https://github.com/scipy/scipy/pull/4320>`__: TST: a few
changes like self.assertTrue(x == y, message) -> assert_equal(x,...
- - `#4321 <https://github.com/scipy/scipy/pull/4321>`__: TST: more changes
like self.assertTrue(x == y, message) -> assert_equal(x,...
- - `#4322 <https://github.com/scipy/scipy/pull/4322>`__: TST: in
test_signaltools, changes like self.assertTrue(x == y,...
- - `#4323 <https://github.com/scipy/scipy/pull/4323>`__: MAINT: clean up
benchmarks so they can all be run as single files.
- - `#4324 <https://github.com/scipy/scipy/pull/4324>`__: Add more detailed
committer guidelines, update MAINTAINERS.txt
- - `#4326 <https://github.com/scipy/scipy/pull/4326>`__: TST: use
numpy.testing in test_hierarchy.py
- - `#4329 <https://github.com/scipy/scipy/pull/4329>`__: MAINT: stats:
rename check_random_state test function
- - `#4330 <https://github.com/scipy/scipy/pull/4330>`__: Update distance
tests
- - `#4333 <https://github.com/scipy/scipy/pull/4333>`__: MAINT: import
comb, factorial from scipy.special, not scipy.misc
- - `#4338 <https://github.com/scipy/scipy/pull/4338>`__: TST: more
conversions from nose to numpy.testing
- - `#4339 <https://github.com/scipy/scipy/pull/4339>`__: MAINT: remove the
deprecated all_mat function from special_matrices.py
- - `#4340 <https://github.com/scipy/scipy/pull/4340>`__: add several
features to frozen distributions
- - `#4344 <https://github.com/scipy/scipy/pull/4344>`__: BUG: Fix/test
invalid lwork param in qr
- - `#4345 <https://github.com/scipy/scipy/pull/4345>`__: Fix test noise
visible with Python 3.x
- - `#4347 <https://github.com/scipy/scipy/pull/4347>`__: Remove deprecated
blas/lapack imports, rename lib to _lib
- - `#4349 <https://github.com/scipy/scipy/pull/4349>`__: DOC: add a
nontrivial example to stats.binned_statistic.
- - `#4350 <https://github.com/scipy/scipy/pull/4350>`__: MAINT: remove
optimize.anneal for 0.16.0 (was deprecated in 0.14.0).
- - `#4351 <https://github.com/scipy/scipy/pull/4351>`__: MAINT: fix usage
of deprecated Numpy C API in optimize...
- - `#4352 <https://github.com/scipy/scipy/pull/4352>`__: MAINT: fix a
number of special test failures
- - `#4353 <https://github.com/scipy/scipy/pull/4353>`__: implement cdf for
betaprime distribution
- - `#4357 <https://github.com/scipy/scipy/pull/4357>`__: BUG: piecewise
polynomial antiderivative
- - `#4358 <https://github.com/scipy/scipy/pull/4358>`__: BUG: integrate:
fix handling of banded Jacobians in odeint, plus...
- - `#4359 <https://github.com/scipy/scipy/pull/4359>`__: MAINT: remove a
code path taken for Python version < 2.5
- - `#4360 <https://github.com/scipy/scipy/pull/4360>`__: MAINT:
stats.mstats: Remove some unused variables (thanks, pyflakes).
- - `#4362 <https://github.com/scipy/scipy/pull/4362>`__: Removed erroneous
reference to smoothing parameter #4072
- - `#4363 <https://github.com/scipy/scipy/pull/4363>`__: MAINT:
interpolate: clean up in fitpack.py
- - `#4364 <https://github.com/scipy/scipy/pull/4364>`__: MAINT: lib: don't
export "partial" from decorator
- - `#4365 <https://github.com/scipy/scipy/pull/4365>`__: svdvals now
returns a length-0 sequence of singular values given...
- - `#4367 <https://github.com/scipy/scipy/pull/4367>`__: DOC: slightly
improve TeX rendering of wishart/invwishart docstring
- - `#4373 <https://github.com/scipy/scipy/pull/4373>`__: ENH: wrap gtsv
and ptsv for solve_banded and solveh_banded.
- - `#4374 <https://github.com/scipy/scipy/pull/4374>`__: ENH: Enhancements
to spatial.cKDTree
- - `#4376 <https://github.com/scipy/scipy/pull/4376>`__: BF: fix reading
off-spec matlab logical sparse
- - `#4377 <https://github.com/scipy/scipy/pull/4377>`__: MAINT: integrate:
Clean up some Fortran test code.
- - `#4378 <https://github.com/scipy/scipy/pull/4378>`__: MAINT: fix usage
of deprecated Numpy C API in signal
- - `#4380 <https://github.com/scipy/scipy/pull/4380>`__: MAINT:
scipy.optimize, removing further anneal references
- - `#4381 <https://github.com/scipy/scipy/pull/4381>`__: ENH: Make DCT and
DST accept int and complex types like fft
- - `#4392 <https://github.com/scipy/scipy/pull/4392>`__: ENH: optimize:
add DF-SANE nonlinear derivative-free solver
- - `#4394 <https://github.com/scipy/scipy/pull/4394>`__: Make reordering
algorithms 64-bit clean
- - `#4396 <https://github.com/scipy/scipy/pull/4396>`__: BUG: bundle
cblas.h in Accelerate ABI wrappers to enable compilation...
- - `#4398 <https://github.com/scipy/scipy/pull/4398>`__: FIX pdist bug
where wminkowski's w.dtype != double
- - `#4402 <https://github.com/scipy/scipy/pull/4402>`__: BUG: fix
stat.hypergeom argcheck
- - `#4404 <https://github.com/scipy/scipy/pull/4404>`__: MAINT: Fill in
the full symmetric squareform in the C loop
- - `#4405 <https://github.com/scipy/scipy/pull/4405>`__: BUG: avoid X +=
X.T (refs #4401)
- - `#4407 <https://github.com/scipy/scipy/pull/4407>`__: improved accuracy
of gompertz distribution for small x
- - `#4414 <https://github.com/scipy/scipy/pull/4414>`__: DOC:fix error in
scipy.signal.cwt documentation.
- - `#4415 <https://github.com/scipy/scipy/pull/4415>`__: ENH: Improve
accuracy of lomax for small x.
- - `#4416 <https://github.com/scipy/scipy/pull/4416>`__: DOC: correct a
parameter name in docstring of SuperLU.solve....
- - `#4419 <https://github.com/scipy/scipy/pull/4419>`__: Restore
scipy.linalg.calc_lwork also in master
- - `#4420 <https://github.com/scipy/scipy/pull/4420>`__: fix a performance
issue with a sparse solver
- - `#4423 <https://github.com/scipy/scipy/pull/4423>`__: ENH: improve
rayleigh accuracy for large x.
- - `#4424 <https://github.com/scipy/scipy/pull/4424>`__: BUG:
optimize.minimize: fix overflow issue with integer x0 input.
- - `#4425 <https://github.com/scipy/scipy/pull/4425>`__: ENH: Improve
accuracy of truncexpon for small x
- - `#4426 <https://github.com/scipy/scipy/pull/4426>`__: ENH: improve
rayleigh accuracy for large x.
- - `#4427 <https://github.com/scipy/scipy/pull/4427>`__: MAINT: optimize:
cleanup of TNC code
- - `#4429 <https://github.com/scipy/scipy/pull/4429>`__: BLD: fix build
failure with numpy 1.7.x and 1.8.x.
- - `#4430 <https://github.com/scipy/scipy/pull/4430>`__: BUG: fix a
sparse.dok_matrix set/get copy-paste bug
- - `#4433 <https://github.com/scipy/scipy/pull/4433>`__: Update
_minimize.py
- - `#4435 <https://github.com/scipy/scipy/pull/4435>`__: ENH: release GIL
around batch distance computations
- - `#4436 <https://github.com/scipy/scipy/pull/4436>`__: Fixed incomplete
documentation for spsolve
- - `#4439 <https://github.com/scipy/scipy/pull/4439>`__: MAINT: integrate:
Some clean up in the tests.
- - `#4440 <https://github.com/scipy/scipy/pull/4440>`__: Fast permutation
t-test
- - `#4442 <https://github.com/scipy/scipy/pull/4442>`__: DOC: optimize:
fix wrong result in docstring
- - `#4447 <https://github.com/scipy/scipy/pull/4447>`__: DOC: signal: Some
additional documentation to go along with the...
- - `#4448 <https://github.com/scipy/scipy/pull/4448>`__: DOC: tweak the
docstring of lapack.linalg module
- - `#4449 <https://github.com/scipy/scipy/pull/4449>`__: fix a typo in the
expit docstring
- - `#4451 <https://github.com/scipy/scipy/pull/4451>`__: ENH: vectorize
distance loops with gcc
- - `#4456 <https://github.com/scipy/scipy/pull/4456>`__: MAINT: don't fail
large data tests on MemoryError
- - `#4461 <https://github.com/scipy/scipy/pull/4461>`__: CI: use
travis_retry to deal with network timeouts
- - `#4462 <https://github.com/scipy/scipy/pull/4462>`__: DOC: rationalize
minimize() et al. documentation
- - `#4470 <https://github.com/scipy/scipy/pull/4470>`__: MAINT: sparse:
inherit dok_matrix.toarray from spmatrix
- - `#4473 <https://github.com/scipy/scipy/pull/4473>`__: BUG: signal: Fix
validation of the zi shape in sosfilt.
- - `#4475 <https://github.com/scipy/scipy/pull/4475>`__: BLD: setup.py:
update min numpy version and support "setup.py...
- - `#4481 <https://github.com/scipy/scipy/pull/4481>`__: ENH: add a new
linalg special matrix: the Helmert matrix
- - `#4485 <https://github.com/scipy/scipy/pull/4485>`__: MRG: some changes
to allow reading bad mat files
- - `#4490 <https://github.com/scipy/scipy/pull/4490>`__: [ENH]
linalg.hessenberg: use orghr - rebase
- - `#4491 <https://github.com/scipy/scipy/pull/4491>`__: ENH: linalg:
Adding wrapper for potentially useful LAPACK function...
- - `#4493 <https://github.com/scipy/scipy/pull/4493>`__: BENCH: the
solve_toeplitz benchmark used outdated syntax and...
- - `#4494 <https://github.com/scipy/scipy/pull/4494>`__: MAINT: stats:
remove duplicated code
- - `#4496 <https://github.com/scipy/scipy/pull/4496>`__: References added
for watershed_ift algorithm
- - `#4499 <https://github.com/scipy/scipy/pull/4499>`__: DOC: reshuffle
stats distributions documentation
- - `#4501 <https://github.com/scipy/scipy/pull/4501>`__: Replace benchmark
suite with airspeed velocity
- - `#4502 <https://github.com/scipy/scipy/pull/4502>`__: SLSQP should
strictly satisfy bound constraints
- - `#4503 <https://github.com/scipy/scipy/pull/4503>`__: DOC: forward port
0.15.x release notes and update author name...
- - `#4504 <https://github.com/scipy/scipy/pull/4504>`__: ENH: option to
avoid computing possibly unused svd matrix
- - `#4505 <https://github.com/scipy/scipy/pull/4505>`__: Rebase of PR 3303
(sparse matrix norms)
- - `#4507 <https://github.com/scipy/scipy/pull/4507>`__: MAINT: fix lobpcg
performance regression
- - `#4509 <https://github.com/scipy/scipy/pull/4509>`__: DOC: sparse:
replace dead link
- - `#4511 <https://github.com/scipy/scipy/pull/4511>`__: Fixed
differential evolution bug
- - `#4512 <https://github.com/scipy/scipy/pull/4512>`__: Change to fully
PEP440 compliant dev version numbers (always...
- - `#4525 <https://github.com/scipy/scipy/pull/4525>`__: made tiny style
corrections (pep8)
- - `#4533 <https://github.com/scipy/scipy/pull/4533>`__: Add exponentially
modified gaussian distribution (scipy.stats.expongauss)
- - `#4534 <https://github.com/scipy/scipy/pull/4534>`__: MAINT:
benchmarks: make benchmark suite importable on all scipy...
- - `#4535 <https://github.com/scipy/scipy/pull/4535>`__: BUG: Changed
zip() to list(zip()) so that it could work in Python...
- - `#4536 <https://github.com/scipy/scipy/pull/4536>`__: Follow up to pr
4348 (exponential window)
- - `#4540 <https://github.com/scipy/scipy/pull/4540>`__: ENH: spatial: Add
procrustes analysis
- - `#4541 <https://github.com/scipy/scipy/pull/4541>`__: Bench fixes
- - `#4542 <https://github.com/scipy/scipy/pull/4542>`__: TST: NumpyVersion
dev -> dev0
- - `#4543 <https://github.com/scipy/scipy/pull/4543>`__: BUG: Overflow in
savgol_coeffs
- - `#4544 <https://github.com/scipy/scipy/pull/4544>`__: pep8 fixes for
stats
- - `#4546 <https://github.com/scipy/scipy/pull/4546>`__: MAINT: use
reduction axis arguments in one-norm estimation
- - `#4549 <https://github.com/scipy/scipy/pull/4549>`__: ENH : Added
group_delay to scipy.signal
- - `#4553 <https://github.com/scipy/scipy/pull/4553>`__: ENH:
Significantly faster moment function
- - `#4556 <https://github.com/scipy/scipy/pull/4556>`__: DOC: document the
changes of the sparse.linalg.svds (optional...
- - `#4559 <https://github.com/scipy/scipy/pull/4559>`__: DOC: stats:
describe loc and scale parameters in the docstring...
- - `#4563 <https://github.com/scipy/scipy/pull/4563>`__: ENH: rewrite of
stats.ppcc_plot
- - `#4564 <https://github.com/scipy/scipy/pull/4564>`__: Be more (or less)
forgiving when user passes +-inf instead of...
- - `#4566 <https://github.com/scipy/scipy/pull/4566>`__: DEP: remove a
bunch of deprecated function from scipy.stats,...
- - `#4570 <https://github.com/scipy/scipy/pull/4570>`__: MNT: Suppress
LineSearchWarning's in scipy.optimize tests
- - `#4572 <https://github.com/scipy/scipy/pull/4572>`__: ENH: Extract
inverse hessian information from L-BFGS-B
- - `#4576 <https://github.com/scipy/scipy/pull/4576>`__: ENH: Split
signal.lti into subclasses, part of #2912
- - `#4578 <https://github.com/scipy/scipy/pull/4578>`__: MNT: Reconcile
docstrings and function signatures
- - `#4581 <https://github.com/scipy/scipy/pull/4581>`__: Fix build with
Intel MKL on Linux
- - `#4583 <https://github.com/scipy/scipy/pull/4583>`__: DOC: optimize:
remove references to unused disp kwarg
- - `#4584 <https://github.com/scipy/scipy/pull/4584>`__: ENH: scipy.signal
- Tukey window
- - `#4587 <https://github.com/scipy/scipy/pull/4587>`__: Hermite asymptotic
- - `#4593 <https://github.com/scipy/scipy/pull/4593>`__: DOC - add example
to RegularGridInterpolator
- - `#4595 <https://github.com/scipy/scipy/pull/4595>`__: DOC: Fix
erroneous latex characters in tutorial/optimize.
- - `#4600 <https://github.com/scipy/scipy/pull/4600>`__: Add return codes
to optimize.tnc docs
- - `#4603 <https://github.com/scipy/scipy/pull/4603>`__: ENH: Wrap LAPACK
``*lange`` functions for matrix norms
- - `#4604 <https://github.com/scipy/scipy/pull/4604>`__: scipy.stats:
generalized normal distribution
- - `#4609 <https://github.com/scipy/scipy/pull/4609>`__: MAINT:
interpolate: fix a few inconsistencies between docstrings...
- - `#4610 <https://github.com/scipy/scipy/pull/4610>`__: MAINT: make
runtest.py --bench-compare use asv continuous and...
- - `#4611 <https://github.com/scipy/scipy/pull/4611>`__: DOC: stats:
explain rice scaling; add a note to the tutorial...
- - `#4614 <https://github.com/scipy/scipy/pull/4614>`__: BUG: lfilter, the
size of zi was not checked correctly for nd...
- - `#4617 <https://github.com/scipy/scipy/pull/4617>`__: MAINT: integrate:
Clean the C code behind odeint.
- - `#4618 <https://github.com/scipy/scipy/pull/4618>`__: FIX: Raise error
when window length != data length
- - `#4619 <https://github.com/scipy/scipy/pull/4619>`__: Issue #4550:
`scipy.stats.mode` - UnboundLocalError on empty...
- - `#4620 <https://github.com/scipy/scipy/pull/4620>`__: Fixed a problem
(#4590) with svds accepting wrong eigenvalue...
- - `#4621 <https://github.com/scipy/scipy/pull/4621>`__: Speed up
special.ai_zeros/bi_zeros by 10x
- - `#4623 <https://github.com/scipy/scipy/pull/4623>`__: MAINT: some
tweaks to spatial.procrustes (private file, html...
- - `#4628 <https://github.com/scipy/scipy/pull/4628>`__: Speed up
signal.lfilter and add a convolution path for FIR filters
- - `#4629 <https://github.com/scipy/scipy/pull/4629>`__: Bug:
integrate.nquad; resolve issue #4599
- - `#4631 <https://github.com/scipy/scipy/pull/4631>`__: MAINT: integrate:
Remove unused variables in a Fortran test function.
- - `#4633 <https://github.com/scipy/scipy/pull/4633>`__: MAINT: Fix
convergence message for remez
- - `#4635 <https://github.com/scipy/scipy/pull/4635>`__: PEP8: indentation
(so that pep8 bot does not complain)
- - `#4637 <https://github.com/scipy/scipy/pull/4637>`__: MAINT: generalize
a sign function to do the right thing for complex...
- - `#4639 <https://github.com/scipy/scipy/pull/4639>`__: Amended typo in
apple_sgemv_fix.c
- - `#4642 <https://github.com/scipy/scipy/pull/4642>`__: MAINT: use lapack
for scipy.linalg.norm
- - `#4643 <https://github.com/scipy/scipy/pull/4643>`__: RBF default
epsilon too large 2020
- - `#4646 <https://github.com/scipy/scipy/pull/4646>`__: Added atleast_1d
around poly in invres and invresz
- - `#4647 <https://github.com/scipy/scipy/pull/4647>`__: fix doc pdf build
- - `#4648 <https://github.com/scipy/scipy/pull/4648>`__: BUG: Fixes #4408:
Vector-valued constraints in minimize() et...
- - `#4649 <https://github.com/scipy/scipy/pull/4649>`__: Vonmisesfix
- - `#4650 <https://github.com/scipy/scipy/pull/4650>`__: Signal example
clean up in Tukey and place_poles
- - `#4652 <https://github.com/scipy/scipy/pull/4652>`__: DOC: Fix the
error in convolve for same mode
- - `#4653 <https://github.com/scipy/scipy/pull/4653>`__: improve erf
performance
- - `#4655 <https://github.com/scipy/scipy/pull/4655>`__: DEP: deprecate
scipy.stats.histogram2 in favour of np.histogram2d
- - `#4656 <https://github.com/scipy/scipy/pull/4656>`__: DEP: deprecate
scipy.stats.signaltonoise
- - `#4660 <https://github.com/scipy/scipy/pull/4660>`__: Avoid extra copy
for sparse compressed [:, seq] and [seq, :]...
- - `#4661 <https://github.com/scipy/scipy/pull/4661>`__: Clean, rebase of
#4478, adding ?gelsy and ?gelsd wrappers
- - `#4662 <https://github.com/scipy/scipy/pull/4662>`__: MAINT: Correct
odeint messages
- - `#4664 <https://github.com/scipy/scipy/pull/4664>`__: Update
_monotone.py
- - `#4672 <https://github.com/scipy/scipy/pull/4672>`__: fix behavior of
scipy.linalg.block_diag for empty input
- - `#4675 <https://github.com/scipy/scipy/pull/4675>`__: Fix lsim
- - `#4676 <https://github.com/scipy/scipy/pull/4676>`__: Added missing
colon to :math: directive in docstring.
- - `#4679 <https://github.com/scipy/scipy/pull/4679>`__: ENH: sparse randn
- - `#4682 <https://github.com/scipy/scipy/pull/4682>`__: ENH: scipy.signal
- Addition of CSD, coherence; Enhancement of...
- - `#4684 <https://github.com/scipy/scipy/pull/4684>`__: BUG: various
errors in weight calculations in orthogonal.py
- - `#4685 <https://github.com/scipy/scipy/pull/4685>`__: BUG: Fixes #4594:
optimize.linprog IndexError when a callback...
- - `#4686 <https://github.com/scipy/scipy/pull/4686>`__: MAINT: cluster:
Clean up duplicated exception raising code.
- - `#4688 <https://github.com/scipy/scipy/pull/4688>`__: Improve
is_distance_dm exception message
- - `#4692 <https://github.com/scipy/scipy/pull/4692>`__: MAINT: stats:
Simplify the calculation in tukeylambda._ppf
- - `#4693 <https://github.com/scipy/scipy/pull/4693>`__: ENH: added
functionality to handle scalars in `stats._chk_asarray`
- - `#4694 <https://github.com/scipy/scipy/pull/4694>`__: Vectorization of
Anderson-Darling computations.
- - `#4696 <https://github.com/scipy/scipy/pull/4696>`__: Fix singleton
expansion in lfilter.
- - `#4698 <https://github.com/scipy/scipy/pull/4698>`__: MAINT: quiet
warnings from cephes.
- - `#4701 <https://github.com/scipy/scipy/pull/4701>`__: add
Bpoly.antiderivatives / integrals
- - `#4703 <https://github.com/scipy/scipy/pull/4703>`__: Add citation of
published paper
- - `#4706 <https://github.com/scipy/scipy/pull/4706>`__: MAINT: special:
avoid out-of-bounds access in specfun
- - `#4707 <https://github.com/scipy/scipy/pull/4707>`__: MAINT: fix issues
with np.matrix as input to functions related...
- - `#4709 <https://github.com/scipy/scipy/pull/4709>`__: ENH:
`scipy.stats` now returns namedtuples.
- - `#4710 <https://github.com/scipy/scipy/pull/4710>`__: scipy.io.idl:
make reader more robust to missing variables in...
- - `#4711 <https://github.com/scipy/scipy/pull/4711>`__: Fix crash for
unknown chunks at the end of file
- - `#4712 <https://github.com/scipy/scipy/pull/4712>`__: Reduce onenormest
memory usage
- - `#4713 <https://github.com/scipy/scipy/pull/4713>`__: MAINT:
interpolate: no need to pass dtype around if it can be...
- - `#4714 <https://github.com/scipy/scipy/pull/4714>`__: BENCH: Add
benchmarks for stats module
- - `#4715 <https://github.com/scipy/scipy/pull/4715>`__: MAINT: polish
signal.place_poles and signal/test_ltisys.py
- - `#4716 <https://github.com/scipy/scipy/pull/4716>`__: DEP: deprecate
mstats.signaltonoise ...
- - `#4717 <https://github.com/scipy/scipy/pull/4717>`__: MAINT:
basinhopping: fix error in tests, silence /0 warning,...
- - `#4718 <https://github.com/scipy/scipy/pull/4718>`__: ENH: stats: can
specify f-shapes to fix in fitting by name
- - `#4721 <https://github.com/scipy/scipy/pull/4721>`__: Document that
imresize converts the input to a PIL image
- - `#4722 <https://github.com/scipy/scipy/pull/4722>`__: MAINT:
PyArray_BASE is not an lvalue unless the deprecated API...
- - `#4725 <https://github.com/scipy/scipy/pull/4725>`__: Fix gengamma
_nump failure
- - `#4728 <https://github.com/scipy/scipy/pull/4728>`__: DOC: add poch to
the list of scipy special function descriptions
- - `#4735 <https://github.com/scipy/scipy/pull/4735>`__: MAINT: stats:
avoid (a spurious) division-by-zero in skew
- - `#4738 <https://github.com/scipy/scipy/pull/4738>`__: TST: silence
runtime warnings for some corner cases in `stats`...
- - `#4739 <https://github.com/scipy/scipy/pull/4739>`__: BLD: try to build
numpy instead of using the one on TravisCI
- - `#4740 <https://github.com/scipy/scipy/pull/4740>`__: DOC: Update some
docstrings with 'versionadded'.
- - `#4742 <https://github.com/scipy/scipy/pull/4742>`__: BLD: make sure
that relaxed strides checking is in effect on...
- - `#4750 <https://github.com/scipy/scipy/pull/4750>`__: DOC: special: TeX
typesetting of rel_entr, kl_div and pseudo_huber
- - `#4751 <https://github.com/scipy/scipy/pull/4751>`__: BENCH: add sparse
null slice benchmark
- - `#4753 <https://github.com/scipy/scipy/pull/4753>`__: BUG: Fixed
compilation with recent Cython versions.
- - `#4756 <https://github.com/scipy/scipy/pull/4756>`__: BUG: Fixes #4733:
optimize.brute finish option is not compatible...
- - `#4758 <https://github.com/scipy/scipy/pull/4758>`__: DOC:
optimize.leastsq default maxfev clarification
- - `#4759 <https://github.com/scipy/scipy/pull/4759>`__: improved stats
mle fit
- - `#4760 <https://github.com/scipy/scipy/pull/4760>`__: MAINT: count bfgs
updates more carefully
- - `#4762 <https://github.com/scipy/scipy/pull/4762>`__: BUGS: Fixes #4746
and #4594: linprog returns solution violating...
- - `#4763 <https://github.com/scipy/scipy/pull/4763>`__: fix small linprog
bugs
- - `#4766 <https://github.com/scipy/scipy/pull/4766>`__: BENCH: add
signal.lsim benchmark
- - `#4768 <https://github.com/scipy/scipy/pull/4768>`__: fix python syntax
errors in docstring examples
- - `#4769 <https://github.com/scipy/scipy/pull/4769>`__: Fixes #4726:
test_cobyla.test_vector_constraints
- - `#4770 <https://github.com/scipy/scipy/pull/4770>`__: Mark FITPACK
functions as thread safe.
- - `#4771 <https://github.com/scipy/scipy/pull/4771>`__: edited
scipy/stats/stats.py to fix doctest for fisher_exact
- - `#4773 <https://github.com/scipy/scipy/pull/4773>`__: DOC: update
0.16.0 release notes.
- - `#4775 <https://github.com/scipy/scipy/pull/4775>`__: DOC: linalg: add
funm_psd as a docstring example
- - `#4778 <https://github.com/scipy/scipy/pull/4778>`__: Use a dictionary
for function name synonyms
- - `#4780 <https://github.com/scipy/scipy/pull/4780>`__: Include
apparently-forgotten functions in docs
- - `#4783 <https://github.com/scipy/scipy/pull/4783>`__: Added many
missing special functions to docs
- - `#4784 <https://github.com/scipy/scipy/pull/4784>`__: add an axis
attribute to PPoly and friends
- - `#4785 <https://github.com/scipy/scipy/pull/4785>`__: Brief note about
origin of Lena image
- - `#4786 <https://github.com/scipy/scipy/pull/4786>`__: DOC: reformat the
Methods section of the KDE docstring
- - `#4787 <https://github.com/scipy/scipy/pull/4787>`__: Add rice cdf and
ppf.
- - `#4792 <https://github.com/scipy/scipy/pull/4792>`__: CI: add a kludge
for detecting test failures which try to disguise...
- - `#4795 <https://github.com/scipy/scipy/pull/4795>`__: Make
refguide_check smarter about false positives
- - `#4797 <https://github.com/scipy/scipy/pull/4797>`__: BUG/TST:
numpoints not updated for incremental Voronoi
- - `#4799 <https://github.com/scipy/scipy/pull/4799>`__: BUG: spatial: Fix
a couple edge cases for the Mahalanobis metric...
- - `#4801 <https://github.com/scipy/scipy/pull/4801>`__: BUG: Fix
TypeError in scipy.optimize._trust-region.py when disp=True.
- - `#4803 <https://github.com/scipy/scipy/pull/4803>`__: Issues with
relaxed strides in QR updating routines
- - `#4806 <https://github.com/scipy/scipy/pull/4806>`__: MAINT: use an
informed initial guess for cauchy fit
- - `#4810 <https://github.com/scipy/scipy/pull/4810>`__: PEP8ify codata.py
- - `#4812 <https://github.com/scipy/scipy/pull/4812>`__: BUG: Relaxed
strides cleanup in decomp_update.pyx.in
- - `#4820 <https://github.com/scipy/scipy/pull/4820>`__: BLD: update Bento
build for sgemv fix and install cython blas/lapack...
- - `#4823 <https://github.com/scipy/scipy/pull/4823>`__: ENH: scipy.signal
- Addition of spectrogram function
- - `#4827 <https://github.com/scipy/scipy/pull/4827>`__: DOC: add csd and
coherence to __init__.py
- - `#4833 <https://github.com/scipy/scipy/pull/4833>`__: BLD: fix issue in
linalg ``*lange`` wrappers for g77 builds.
- - `#4841 <https://github.com/scipy/scipy/pull/4841>`__: TST: fix test
failures in scipy.special with mingw32 due to test...
- - `#4842 <https://github.com/scipy/scipy/pull/4842>`__: DOC: update
site.cfg.example. Mostly taken over from Numpy
- - `#4845 <https://github.com/scipy/scipy/pull/4845>`__: BUG: signal: Make
spectrogram's return values order match the...
- - `#4849 <https://github.com/scipy/scipy/pull/4849>`__: DOC:Fix error in
ode docstring example
- - `#4856 <https://github.com/scipy/scipy/pull/4856>`__: BUG: fix typo
causing memleak

Checksums
=========

MD5
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