[SciPy-User] Installation checklist for SciPy tutorials
Dav Clark
dav at alum.mit.edu
Sun Aug 9 20:33:06 EDT 2009
Hey Fernando (and Ondrej and...),
I ran the adv_tut... script in EPD 4.3.0, and during the sympy test,
it drops into pdb. I'm guessing this is because you're using the --
pdb option in the argv to nose.runmodule, and so when you raise an
exception, you drop the user into pdb. Have a look at the transcript
below... I think you'll agree that this output is pretty cryptic!
I'm running EPD 4.3.0, which the advanced tutorial (by Ondrej Certik)
says is OK for sympy (even though it's not the "required" sympy
version - I'm guessing there are some downstream fixes to the "0.6.2"
version in EPD?). You could figure out it's EPD 4.3.0 by parsing
sys.version in validate_sympy.
But I think the deeper issue is that you're throwing an exception that
for some reason doesn't get caught by nose, but rather drops the user
into pdb. Other "exceptions" (such as the nt.assert_true in
validate_cython) do get handled in a sensible way by nose. Should all
exceptions be nose assertions? Or is there some deeper reason for
having some tests actually raise {\tt Exceptions}? On the flipside,
removing the '--pdb' option makes the script do what you expect a unit-
test script to do.
Anyway, I don't really know what I'm doing with nose at this point,
but I figured removing the '--pdb' makes pretty good sense. I also
made the change to look for EPD 4.3.0 in validate_sympy. Ondrej (or
anyone else), please correct me if my understanding of the tutorial
description is incorrect! Inline, I've also included my transcript
from your original script on EPD 4.3.0 (OSX intel) below...
Cheers,
Dav
In [2]: run adv_tut_checklist.py
Running tests:
__main__.test_imports('setuptools', None) ... MOD: setuptools,
version: 0.6c9-s1
ok
__main__.test_imports('IPython', None) ... MOD: IPython, version: 0.9.1
ok
__main__.test_imports('numpy', None) ... MOD: numpy, version: 1.3.0
ok
__main__.test_imports('scipy', None) ... MOD: scipy, version:
0.8.0.dev5698
ok
__main__.test_imports('scipy.io', None) ... MOD: scipy.io, version:
*no info*
ok
__main__.test_imports('matplotlib', <function validate_mpl at
0x186bf30>) ... MOD: matplotlib, version: 0.98.5.2
ok
__main__.test_imports('pylab', None) ... MOD: pylab, version: *no info*
ok
__main__.test_imports('enthought.mayavi.api', None) ... MOD:
enthought.mayavi.api, version: 3.2.0n2
ok
__main__.test_imports('scipy.weave', None) ... MOD: scipy.weave,
version: 0.4.9
ok
__main__.test_imports('sympy', <function validate_sympy at
0x186bfb0>) ... > /Users/dav/Desktop/tmp-testdata-Leycyo/
adv_tut_checklist.py(90)validate_sympy()
-> (version, min_version))
(Pdb)
[That's where the script stops executing! You can get a bt or
similar, but that's pretty opaque too. Note the explicit lack of
actual error message... I guess this is how you test if we are really
"advanced"?]
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