[SciPy-User] scikits.sparse
Nils Wagner
nwagner at iam.uni-stuttgart.de
Sat Feb 20 05:05:56 EST 2010
Hi,
I tried to install scikits.sparse.
It failed with
nwagner at linux-mogv:~/hg/scikits.sparse> python setup.py
install --prefix=$HOME/local
/home/nwagner/local/lib64/python2.6/site-packages/setuptools-0.6c9-py2.6.egg/setuptools/command/sdist.py:4:
UserWarning: Module pkg_resources was already imported
from
/home/nwagner/local/lib64/python2.6/site-packages/setuptools-0.6c9-py2.6.egg/pkg_resources.py,
but
/home/nwagner/local/lib64/python2.6/site-packages/distribute-0.6.4-py2.6.egg
is being added to sys.path
/home/nwagner/local/lib64/python2.6/site-packages/setuptools-0.6c9-py2.6.egg/setuptools/command/sdist.py:4:
UserWarning: Module setuptools was already imported from
/home/nwagner/local/lib64/python2.6/site-packages/setuptools-0.6c9-py2.6.egg/setuptools/__init__.py,
but
/home/nwagner/local/lib64/python2.6/site-packages/distribute-0.6.4-py2.6.egg
is being added to sys.path
/home/nwagner/local/lib64/python2.6/site-packages/setuptools-0.6c9-py2.6.egg/setuptools/command/sdist.py:4:
UserWarning: Module site was already imported from
/usr/lib64/python2.6/site.pyc, but
/home/nwagner/local/lib64/python2.6/site-packages/distribute-0.6.4-py2.6.egg
is being added to sys.path
/home/nwagner/local/lib64/python2.6/site-packages/Pyrex/Compiler/Errors.py:17:
DeprecationWarning: BaseException.message has been
deprecated as of Python 2.6
self.message = message
running install
running bdist_egg
running egg_info
writing requirements to
scikits.sparse.egg-info/requires.txt
writing scikits.sparse.egg-info/PKG-INFO
writing namespace_packages to
scikits.sparse.egg-info/namespace_packages.txt
writing top-level names to
scikits.sparse.egg-info/top_level.txt
writing dependency_links to
scikits.sparse.egg-info/dependency_links.txt
writing requirements to
scikits.sparse.egg-info/requires.txt
writing scikits.sparse.egg-info/PKG-INFO
writing namespace_packages to
scikits.sparse.egg-info/namespace_packages.txt
writing top-level names to
scikits.sparse.egg-info/top_level.txt
writing dependency_links to
scikits.sparse.egg-info/dependency_links.txt
reading manifest file
'scikits.sparse.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files matching '*~' found
anywhere in distribution
warning: no previously-included files matching '*.so'
found anywhere in distribution
warning: no previously-included files matching '*.pyc'
found anywhere in distribution
writing manifest file
'scikits.sparse.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-2.6
creating build/lib.linux-x86_64-2.6/scikits
copying scikits/__init__.py ->
build/lib.linux-x86_64-2.6/scikits
creating build/lib.linux-x86_64-2.6/scikits/sparse
copying scikits/sparse/__init__.py ->
build/lib.linux-x86_64-2.6/scikits/sparse
copying scikits/sparse/test_cholmod.py ->
build/lib.linux-x86_64-2.6/scikits/sparse
running build_ext
cythoning scikits/sparse/cholmod.pyx to
scikits/sparse/cholmod.c
Error converting Pyrex file to C:
------------------------------------------------------------
...
# 0xA (alpha)
# 0xB (beta)
# 0xC (release candidate)
# 0xF (final)
char[] PY_VERSION
^
------------------------------------------------------------
/usr/lib64/python2.6/site-packages/Cython/Includes/python_version.pxd:31:8:
Buffer types only allowed as function local variables
Error converting Pyrex file to C:
------------------------------------------------------------
...
# 0xB (beta)
# 0xC (release candidate)
# 0xF (final)
char[] PY_VERSION
char[] PY_PATCHLEVEL_REVISION
^
------------------------------------------------------------
/usr/lib64/python2.6/site-packages/Cython/Includes/python_version.pxd:32:8:
Buffer types only allowed as function local variables
How can I fix the problem ?
pyrexc --version
/home/nwagner/local/lib64/python2.6/site-packages/Pyrex/Compiler/Errors.py:17:
DeprecationWarning: BaseException.message has been
deprecated as of Python 2.6
self.message = message
Pyrex version 0.9.8.5
Nils
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