[SciPy-User] Scipy with pip compliation problems on Centos 6.6

Robinson, Roger Roger.Robinson at evotec.com
Tue Feb 24 11:11:11 EST 2015


Hi,

I am on CentOS 6.6. I have compiled BLAS+ATLAS+LAPACK separately on a network drive.

I have python 2.7.9 compiled.

Im using this command to install + complie scipy
pip install --target=/apps_shared/python/scipy/scipy-0.15.1 scipy

I get this error

Python 2.7.9 (default, Feb 16 2015, 11:29:23)
[GCC 4.4.7 20120313 (Red Hat 4.4.7-11)] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from scipy.stats import genextreme
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/apps_shared/python/scipy/current/scipy/stats/__init__.py", line 338, in <module>
    from .stats import *
  File "/apps_shared/python/scipy/current/scipy/stats/stats.py", line 184, in <module>
    import scipy.special as special
  File "/apps_shared/python/scipy/current/scipy/special/__init__.py", line 586, in <module>
    from ._ufuncs import *
ImportError: /apps_shared/python/scipy/current/scipy/special/_ufuncs.so: undefined symbol: dstevr_

Any advice ?

Thanks Roger
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