Mailman 3 - FURY - python.org

Google Summer of Code
by peter frane April 4, 2023

April 4, 2023

To whom it may concern, I am interested in contributing to Project 4. Dynamic text rendering with support for UTF-8 and FreeType-compatible fonts. I am currently enrolled at Datacamp where I have been studying Data Analysis with Python, R, and SQL since November 2022. I am also proficient in computer graphics, especially text rendering (baseline alignment, kerning/spacing, subpixel glyph rendering/positioning, etc.) and font handling. I have written a library for subsetting Type 1 fonts, … [View More]

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Google Summer of Code
by peter frane April 4, 2023

April 4, 2023

To whom it may concern, I am interested in contributing to Project 4. Dynamic text rendering with support for UTF-8 and FreeType-compatible fonts. I am currently enrolled at Datacamp where I have been studying Data Analysis with Python, R, and SQL since November 2022. I am also proficient in computer graphics, especially text rendering (baseline alignment, kerning/spacing, subpixel glyph rendering/positioning, etc.) and font handling. I have written a library for subsetting Type 1 fonts, … [View More]

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Hurry up! Book your spot for the DIPY Workshop in LA! April 24-28 2023!!
by Eleftherios Garyfallidis April 3, 2023

April 3, 2023

Dear all, Only a few spots are left. Register now: https://dipy.org/workshops/latest !!! The complete program for the highly anticipated workshop is updated and available in the link above. DIPY is a powerful software library for analyzing and processing diffusion MRI data. It is an open-source project with a large and active community of contributors who are dedicated to advancing the field of medical imaging. The DIPY workshop provides an excellent opportunity for individuals to learn … [View More]how to use this software effectively. The workshop covers a broad range of topics, from basic concepts to advanced techniques, and provides hands-on experience with the software. By attending the DIPY workshop, you will not only learn how to use this powerful tool, but also gain a deeper understanding of diffusion imaging and machine learning for imaging in general. The workshop is led by expert instructors who have extensive experience in both diffusion imaging and DIPY, so attendees can be confident that they are receiving accurate and up-to-date information. [image: image.png] In summary, the workshop offers: - Hands-on tutorials - Every single day of the 5 days !!! - Guided practice sessions (bring your data - optional) - Personalized certificates of attendance - Effective networking opportunities with one-to-one follow ups - Comprehensive explanation of theoretical foundations with practical examples - Access to latest and established methods with code and interfaces - Pointers to move beyond the current challenges and navigate hard to do analyses - Multiple clinical use cases (AZ, Parkinson’s etc.) See above one of the many highlights of the workshop. Building synthetic b0s (with Synb0) in DIPY 1.7.0! More highlights here <https://dipy.org/workshops/dipy-workshop-2023#Highlight>. Please allow us to finish this email with a testimonial from one of our last in person workshops: This one is from an expert neuropsychologist: “In recent years, I've found that many scientific conferences have become plagued with pitfalls such as repetitive content, superficial networking, and a focus on self-promotion rather than genuine knowledge exchange. Attendees often leave these events with a sense of disillusionment, feeling that their time could have been better spent elsewhere. The DIPY workshop, however, was a breath of fresh air in this sea of mediocrity. It was highly interactive, engaging, and hands-on, with a genuine emphasis on learning and collaboration. The organizers went above and beyond to create a welcoming and supportive environment, encouraging researchers of all backgrounds and expertise levels to contribute their ideas and gain valuable insights. By addressing the shortcomings of traditional conferences, the DIPY workshop has rekindled my enthusiasm for scientific events and has set a new standard for what a truly productive and inspiring gathering should be.” We kept our promise! Get your tickets! See you in the workshop! Eleftherios Garyfallidis, PhD Associate Professor Intelligent Systems Engineering Indiana University Luddy Hall 700 N Woodlawn Bloomington, IN 47408 DIPY <http://dipy.org/> | FURY <https://fury.gl/> [View Less]

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Interest to become a part of FURY's GSoC 2023
by Clark Shi March 5, 2023

March 5, 2023

Hi mentors in FURY, My name is Zhiwen Shi. I am so excited to find FURY in GSoC 2023 and can’t wait to talk to you about the project and possibilities we could do in this summer. Let me give a brief about myself: I am now living in Denmark with my wife and two little kids. I graduated from the University of Copenhagen as a master of computational chemistry. I have a strong interest in Cloud Technology and the implementation of HPC with could solutions. Among these solutions, there are many … [View More]new and popular python based scientific packages involved, fx OpenMM, PySCF. These open source packages motivate me to get know more about the software engineering of a python package. I am seeking a good start up project for myself to get on board. I think FURY with GSoC will be a great match for me: 1. Python based. 2. New contributor friendly. 3. With Mentor. 4. Chemistry related. 5. Using conda forge. I have read the ‘expectations’ page, here is my short answer for them: 40 hours/week => I take this as a full time project. So I have the commitment to it. Self-motivation and steady schedule => I am self-motivated and I am good at it. I have two kids to take care, so I am serious about how to use my time. This is what I love to do. I will spend good time with mentor to make a good plan for the whole project and break the plan down to every week, everyday. We will together make the most out of it :) Frequent communication with mentor => We will have a good relationship during the project. The mentor is the leader and I am the runner. Teamwork works. We will also make up a plan about the communication, how often, via what, how about the regular communication, how about the urgent? etc.. Version control => I am new to a big "hands on" project, but I am not new to use ‘git’. I am aware of the importance of this tool in the project. Community => I’d love to join the community of FURY and I think it is spirit of the open source project. I will ask a lot and hopefully answer a lot in the near future. Design documents => I will work out this with my mentor and maintain it. It will be a memorable documentation of the project. I am currently going through the steps before applying for the GSoC, will try to make my first contribution to FURY soon. Regarding the project that I am interested, I would like to start with "Scientific axes for FURY” with mentors Filipi N. Silva and Serge Koudoro. I hope I can hear from you from this email:) That’s all I want to say for my first email to express my excitement. I need to start moving to get my opportunity now ;p Have a nice week Zhiwen (Clark) [View Less]

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I want to be part of this organization Google Summer of Code GSOC 2023
by Marinica Denis March 5, 2023

March 5, 2023

Hi, I want to be part of this organization Google Summer of Code GSOC 2023! Can you tell me some details about what I should do to be accepted, I would really like to take part in this program and be able to learn as many things as possible. I want to be part of the discord group and interact with the team if possible. Basic details _____________________________________________________________________________________ My name is Marinica Denis Andrei, I live in Bucharest, Romania, Eastern … [View More]European Time (GMT+2). As a bachelor's degree, I graduated from the Polytechnic University of Bucharest, Faculty of Industrial Engineering and Robotics, "Robotics and Computer Science" department, the final grade obtained being 9.5/10, having as a diploma project the realization of a robotic cell for depalletizing, labeling and repalletizing of cardboard boxes integrating an ABB IRB 760 articulated arm industrial robot from the ABB company. To complete the diploma project, I realized the 3D simulation of the entire robotic cell using a microcontroller from the ABB company, internet networks and signals created in the ABB Robot Studio software. I made the simulation using python and C# scripts. We also made a matrix of accelerations and rotations for the integrated robot, calculations of tangential and centrifugal forces made in Matlab and an automatic tracking system made in python. I am currently a master's student at the Polytechnic University of Bucharest, at the Faculty of Automation and Computer Science, majoring in "Computer Science, Advanced Control and Real-Time Systems", the grade obtained in the entrance exam being 10/10. I have already started the dissertation project, continuing the bachelor's project. This project involves the realization of the physically articulated arm type robot, the components being made through the additive manufacturing process (3D printing), integrating Arduino components and servomotors. For this robot, I started programming two offline and online applications. The programming of the industrial robot is done through the Arduino IDE and the C programming language, the robot having commands that it can take from the serial bus. The offline application is made with the Python programming language, having several panels that can interact with the operating system and CAD-type programs, tracking signals, positions that can be transposed in graphic form, control of individual servomotors and the control carried out on coordinate axes correlating several servomotors to achieve the movement. I have also integrated an online application, an application created as a back-end using the Python programming language, the Flask library, Jinja, pyserial (for transmitting serial signals to the robot), mathplotlib (for making graphs), pandas, numpy (for reading a document with a code already registered for programming the robot), SQL and pylogin (for the registration in a database of each account created on the online application), various APIs for webscraping of information displayed in real time from (Google search , google scholar, youtube, google patents), BS4 and Selenium for webdriver automation and information retrieval through webscraping. Also, the front-end part is made through HTML, CSS, SASS, JS, Bootstrap5, MediaQuery. The application also has an authentication and creation system for user accounts and a 2-factor authentication system, through which the user enters the email address and receives an automatic verification code. I currently work as a System Engineer in the Continental Automotive company, ADAS Autonomus Mobility department. The technologies used are C, C++, Python, CAN, SPI, ETHERNET. On the requirements side, I use IMS, Jira, Confluence, DOORS NG, Jazz. I am assigned to 3 different projects, 50 percent I work on the "Market Intelligence and Concept Development" project, it involves the analysis of the global market and products for the improvement of Continental products, the creation of scripts with trend and seasonal data prediction algorithms, the creation system architecture (hardware and software), extracting data from the Internet and filtering them through webscraping technology and creating relevant charts for market analysis. All this is done through Python, C and Matlab languages. For the rest of the projects, I am assigned 25 percent each, the first one being "camera, ultrasonic and satellites", realizing the software and hardware architecture together with the domains, and the other project being (DeepDrive) for which I analyze the image from the camera at the pixel level, detection, distances with Python and C. In the past I worked as a Software Test Automation Engineer in the Luxoft company for the creation of a camera for detection, processing and transmission of signals to the ECU. I analyze exports from the script based on a test plan. The csv exports were the values of all CAN and SPI signals for each frame. Also, with each software release, we inject new software by flashing the camera, test and realize certain events in Canoe and create automatic testing scripts, automatic flashing. Statement of Motivation _____________________________________________________________________________________ My motivation comes from my passion for the software field, all my hobbies are related to this field, I have always tried to occupy my time developing my programming knowledge, I constantly follow courses for programming, computer science, I constantly do problems on leetcode for C , JS and Python to practice my logical thinking and develop a lot. I really want to be accepted in the Google Summer of Code program because I want to develop myself, I want to learn as much as possible to have a very solid portfolio of projects and experience and to be able to apply all the knowledge I have. I am very excited because I have this opportunity, I want to be the best in what I do and satisfy my boundless passion for software and technology. The programming languages and technologies I am passionate about are python, django, docker, angularjs, aws, machine learning, artificial intelligence, computer vision, deep learning, AI/ML. I want to be part of this organization because I really like the technologies you use, I want to develop myself in this part of machine learning and artificial intelligence, to be able to interact with as many experts as possible and to be able to participate in the development of an important project in this organization. Following this organization and this project, I want to accumulate a lot of experience, learn a lot and interact with technologies and projects and be able to interact with the thinking of experts in this field. Experiences _____________________________________________________________________________________ My experience in this direction is accumulated both from the jobs I had and from the educational institutions I attend and from which I graduated. Constantly, since high school, I followed a lot of trainings on programming, computer science, machine learning, artificial intelligence, but also a lot of tests for certifications. Courses: - Udemy - Course - 100 Days of Code: The Complete Python Pro Bootcamp - Udemy - Course - Python Programming - Udemy - Course - The Python Bible - Udemy - Course - C++ - Udemy – Course – C Programming for beginners – Master the C language (in progress) - CS50 Introduction to Computer Science – Harvard University (in progress) - Luxoft course – Python Basic - Luxoft course – Professional Python - Luxoft course – Introduction to Git - Luxoft course – Advanced C programming pointers - Luxoft course – C++ High Performance - Luxoft course – Open Source Software - Luxoft course – Software Test Design - Luxoft course – ASPICE/DQMS Certifications: - freeCodeCamp - Scientific Computing with Python - HIL Academy – Test Automation - C# - LinkedIn Skill Assessment badge - C (Programming Language) - LinkedIn Skill Assessment badge - Machine Learning - LinkedIn Skill Assessment badge - IT Operations - LinkedIn Skill Assessment badge - MATLAB - LinkedIn Skill Assessment badge - Object-Oriented Programming (OOP) - LinkedIn Skill Assessment badge - Agile Methodologies - LinkedIn Skill Assessment badge - Git - LinkedIn Skill Assessment badge - Python (Programming Language) - LinkedIn Skill Assessment badge - ISTQB Certified Tester Foundation - AUTOSAR Classic Fundamentals Project details _____________________________________________________________________________________ I would like to be part of a project that uses an advanced technology because I really like challenges, I want to learn as much as possible to interact as much as possible with advanced algorithms and structures and to interact with an advanced mentor and expert in the field. I would really like to be able to talk to an expert to choose the best possible project that will represent the best possible experience for me. Regarding the time I want to allocate, I want to get involved in the development of the project and to work every day from Monday to Sunday and during work hours and after work hours, of course also on weekends. Time is not a problem for me, I want to devote myself as much as possible and learn as many things as possible because, as I said, I am passionate. [View Less]

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ANN: DIPY 1.6.0
by Eleftherios Garyfallidis Feb. 28, 2023

Feb. 28, 2023

Hello all, We are excited to announce a new release of DIPY: DIPY 1.6.0 is out from the oven! In addition, registration for the oceanic DIPY workshop 2023 (April 24-28) is now open! Our comprehensive program is designed to equip you with the skills and knowledge needed to master the latest techniques and tools in structural and diffusion imaging. An intense hands-on experience in Santa Monica, Los Angeles! See the exquisite program here <https://dipy.org/workshops/dipy-workshop-2023#… [View More]Schedule> for this highly anticipated event <https://dipy.org/workshops/dipy-workshop-2023>. DIPY 1.6.0 (Monday, 16 January 2023) The release 1.6.0 received contributions from 22 developers (the full release notes are at: https://dipy.org/documentation/1.6.0./release_notes/release1.6/). Thank you all for your contributions and feedback! Please click here <https://dipy.org/documentation/1.6.0./api_changes/#dipy-1-6-0-changes> to check 1.6.0 API changes. Highlights of 1.6.0 release include: - NF: Unbiased groupwise linear bundle registration added. - NF: MAP+ constraints added. - Generalized PCA to less than 3 spatial dims. - Added positivity constraints to QTI. - New functionality to apply Symmetric Diffeomorphic Registration to points/streamlines. - New Human Connectome Project (HCP) data fetcher added. - New Healthy Brain Network (HBN) data fetcher added. - Multiple Workflows updated (DTIFlow, LPCAFlow, MPPCA) and added (RUMBAFlow). - Ability to handle VTP files. - Large codebase cleaning. - Large documentation update. - Closed 75 issues and merged 41 pull requests. To upgrade or install <http://dipy.org/release0.10.html> DIPY Run the following command in your terminal: <http://dipy.org/release0.10.html> pip install --upgrade dipy or conda install -c conda-forge dipy This version of DIPY depends on nibabel (3.0.0+). For visualization you need FURY (0.8.0+). Please support us by citing DIPY in your papers using the following DOI: 10.3389/fninf.2014.00008 <https://www.ncbi.nlm.nih.gov/pubmed/24600385> Questions or suggestions? For any questions go to https://dipy.org, or send an e-mail to dipy(a)python.org <neuroimaging(a)python.org> We also have an instant messaging service and chat room available at https://gitter.im/dipy/dipy Finally, a new forum is available at https://github.com/dipy/dipy/discussions Have a wonderful time using the new version. On behalf of the DIPY developers, Eleftherios Garyfallidis, Ariel Rokem, Serge Koudoro https://dipy.org/contributors [View Less]

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Registration for DIPY Workshop 2023 is now open! April 24-28, Santa Monica, CA
by Eleftherios Garyfallidis Feb. 17, 2023

Feb. 17, 2023

Hello all, We are excited to announce that the registration for the DIPY Workshop 2023 is now open! Registration, program and more information is available at https://dipy.org/workshops/latest. This is an in person event. This year we are introducing a full day of Preprocessing (a challenging problem) and discussing new topics in Reconstruction, Microstructure Modeling, Denoising, Tractography, Tractometry and Visualization! In addition, Matthew Brett will talk about Nibabel which is an … [View More]

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March 19, 2022

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DIPY Workshop 2022 - Online Edition
by Eleftherios Garyfallidis March 11, 2022

March 11, 2022

Dear Neuroimaging Community, The Online DIPY Workshop is back with a great lineup of topics and speakers! Please forward this email to any interested parties. [image: image.png] For registration and more information please visit https://dipy.org/workshops/latest On behalf of the DIPY team, Eleftherios Garyfallidis, PhD Assistant Professor Intelligent Systems Engineering Indiana University Luddy Hall 700 N Woodlawn Bloomington, IN 47408 GRG <https://grg.luddy.indiana.edu/> | DIPY <… [View More]

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