Re: [scikit-image] Tools for 3D segmentation ?
Well, almost three years ago we had a GSoC student work on it… =P Assuming you mean manual 3D segmentation, I second Greg’s recommendation of ITK-SNAP for fully manual segmentation. For semi-automated work, I recommend Ilastik (ilastik.org). Juan. On 5 Apr 2017, 7:43 PM -0400, Gregory Lee <grlee77@gmail.com>, wrote:
I was wondering if anyone on the list knew about software to do 3d segmentation.
Thanks Vighnesh
A nice, free GUI-based tool for interactive 3D segmentation is itk-snap http://www.itksnap.org/
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Hey guys Sorry for not being clear about this. What I meant is manual labelling of 3D volumes. I cannot reveal all the details, but it's basically a foreground Vs background labelling task. On 5 Apr 2017 9:52 pm, "Juan Nunez-Iglesias" <jni.soma@gmail.com> wrote:
Well, almost three years ago we had a GSoC student work on it… =P
Assuming you mean manual 3D segmentation, I second Greg’s recommendation of ITK-SNAP for fully manual segmentation. For semi-automated work, I recommend Ilastik (ilastik.org).
Juan.
On 5 Apr 2017, 7:43 PM -0400, Gregory Lee <grlee77@gmail.com>, wrote:
I was wondering if anyone on the list knew about software to do 3d
segmentation.
Thanks Vighnesh
A nice, free GUI-based tool for interactive 3D segmentation is itk-snap http://www.itksnap.org/
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participants (2)
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Juan Nunez-Iglesias -
Vighnesh Birodkar