pf = MyOutputs.FileStaticOutputFourPi('/Users/dccollins/ThisScratch/param//Turbulence/t64_1lev_m/./DD0001/data0001') pf.h Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Users/dccollins/local/src/yt-hg/yt/data_objects/static_output.py",
Hi, all-- I have this simulation that has a single subgrid. 64^3 root, 24 zone root grid (from 0.15625 to 0.34375 along each axis) With the old output style (enzo1.0.1) this doesn't give me any problems. But with the new output version (packed IO, newgridio-no, in mhdctmerge) I get the following message3 <trace> line 159, in _get_hierarchy self.__hierarchy = self._hierarchy_class(self, data_style=self.data_style) File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 158, in __init__ AMRHierarchy.__init__(self, pf, data_style) File "/Users/dccollins/local/src/yt-hg/yt/data_objects/hierarchy.py", line 70, in __init__ self._parse_hierarchy() File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 220, in _parse_hierarchy if self._parse_binary_hierarchy(): return File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 295, in _parse_binary_hierarchy self.grid_dimensions[:] = f["/ActiveDimensions"][:] ValueError: shape mismatch: objects cannot be broadcast to a single shape
pdb.pm() /Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py(295)_parse_binary_hierarchy() -> self.grid_dimensions[:] = f["/ActiveDimensions"][:] (Pdb) self.grid_dimensions array([[1, 1, 1], [1, 1, 1]], dtype=int32) (Pdb) f['/ActiveDimensions'][:] array([[64, 64, 64], [32, 32, 16], [32, 32, 16]], dtype=int32) (Pdb) </trace>
Why is self.grid_dimensions a 2d array? Why don't these things match? Thanks! d. -- Sent from my computer.
Hi Dave, Looks like a leftover .yt. (and why newgridio-no?) Adding a hash checking and invalidation system to the .yt files would be a great intro project for new developers and would be super useful... -Matt On Aug 19, 2011 5:05 PM, "david collins" <antpuncher@gmail.com> wrote:
Hi, all--
I have this simulation that has a single subgrid. 64^3 root, 24 zone root grid (from 0.15625 to 0.34375 along each axis)
With the old output style (enzo1.0.1) this doesn't give me any problems. But with the new output version (packed IO, newgridio-no, in mhdctmerge) I get the following message3
pf = MyOutputs.FileStaticOutputFourPi('/Users/dccollins/ThisScratch/param//Turbulence/t64_1lev_m/./DD0001/data0001') pf.h Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Users/dccollins/local/src/yt-hg/yt/data_objects/static_output.py",
<trace> line 159, in _get_hierarchy self.__hierarchy = self._hierarchy_class(self, data_style=self.data_style) File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 158, in __init__ AMRHierarchy.__init__(self, pf, data_style) File "/Users/dccollins/local/src/yt-hg/yt/data_objects/hierarchy.py", line 70, in __init__ self._parse_hierarchy() File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 220, in _parse_hierarchy if self._parse_binary_hierarchy(): return File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 295, in _parse_binary_hierarchy self.grid_dimensions[:] = f["/ActiveDimensions"][:] ValueError: shape mismatch: objects cannot be broadcast to a single shape
pdb.pm()
/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py(295)_parse_binary_hierarchy() -> self.grid_dimensions[:] = f["/ActiveDimensions"][:] (Pdb) self.grid_dimensions array([[1, 1, 1], [1, 1, 1]], dtype=int32) (Pdb) f['/ActiveDimensions'][:] array([[64, 64, 64], [32, 32, 16], [32, 32, 16]], dtype=int32) (Pdb) </trace>
Why is self.grid_dimensions a 2d array? Why don't these things match?
Thanks! d.
-- Sent from my computer. _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Looks like a leftover .yt. (and why newgridio-no?)
Aah, I'll give that a shot. I thought I was killing everything, perhaps I missed something. I have newgridio-no presently because I haven't gotten to the new grid IO yet with the merger. Should be only temporary.
Adding a hash checking and invalidation system to the .yt files would be a great intro project for new developers and would be super useful...
-Matt
On Aug 19, 2011 5:05 PM, "david collins" <antpuncher@gmail.com> wrote:
Hi, all--
I have this simulation that has a single subgrid. 64^3 root, 24 zone root grid (from 0.15625 to 0.34375 along each axis)
With the old output style (enzo1.0.1) this doesn't give me any problems. But with the new output version (packed IO, newgridio-no, in mhdctmerge) I get the following message3
pf = MyOutputs.FileStaticOutputFourPi('/Users/dccollins/ThisScratch/param//Turbulence/t64_1lev_m/./DD0001/data0001') pf.h Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Users/dccollins/local/src/yt-hg/yt/data_objects/static_output.py",
<trace> line 159, in _get_hierarchy self.__hierarchy = self._hierarchy_class(self, data_style=self.data_style) File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 158, in __init__ AMRHierarchy.__init__(self, pf, data_style) File "/Users/dccollins/local/src/yt-hg/yt/data_objects/hierarchy.py", line 70, in __init__ self._parse_hierarchy() File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 220, in _parse_hierarchy if self._parse_binary_hierarchy(): return File "/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py", line 295, in _parse_binary_hierarchy self.grid_dimensions[:] = f["/ActiveDimensions"][:] ValueError: shape mismatch: objects cannot be broadcast to a single shape
pdb.pm()
/Users/dccollins/local/src/yt-hg/yt/frontends/enzo/data_structures.py(295)_parse_binary_hierarchy() -> self.grid_dimensions[:] = f["/ActiveDimensions"][:] (Pdb) self.grid_dimensions array([[1, 1, 1], [1, 1, 1]], dtype=int32) (Pdb) f['/ActiveDimensions'][:] array([[64, 64, 64], [32, 32, 16], [32, 32, 16]], dtype=int32) (Pdb) </trace>
Why is self.grid_dimensions a 2d array? Why don't these things match?
Thanks! d.
-- Sent from my computer. _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Sent from my computer.
participants (3)
-
david collins -
David Collins -
Matthew Turk