[Neuroimaging] 3d registration for data fusion in material science

[Eleftherios Garyfallidis]

Hi Gael,

Sounds exciting. There is no restriction to use our tools in other
libraries or domains.
Look at these tutorials please (you need dipy development version)

https://github.com/nipy/dipy/blob/master/doc/examples/affine_registration_3d.py
https://github.com/nipy/dipy/blob/master/doc/examples/syn_registration_2d.py
https://github.com/nipy/dipy/blob/master/doc/examples/syn_registration_3d.py

Do you have a github repo of your project? Do you have any example
pictures/volumes to show us that you would
like to register?

Cheers,
Eleftherios



On Thu, Aug 20, 2015 at 9:31 AM, GORET Gael 246279 <Gael.GORET at cea.fr>
wrote:

> Hi everybody,
>
> I am a (French) newcomer, working on the development of the data fusion of
> Time-of-Flight Secondary Ion Mass Spectrometer (ToF-SIMS) and X ray
> Nano-Tomography (XuM) data at the CEA (the French state institute for
> energy, high-tech, etc.).
>
> In terms of samples, we’re a bit far from the neuro-fields … Solid oxide
> fuel cell, 3D chips, Si/Li matrix, etc., but in terms of methodology I hope
> we have to share … my project is to combine a chemical information (from
> ToF-SIMS) with X-ray absorption (given by XuM) for a given volume (at
> nano-scale).  I am tackling a python module aiming to the registration of
> 3d datasets. it seems that nipy includes a such possibility (an a lot more
> …).
>
> I’m a computer guy, mostly Pythonist and I wander if you would let  me
> transpose your code (mainly the registration part) to my problematic, I
> would be very grateful for this.
>
> In this context would you have some advice for me ?
>
> I'm looking forward to hearing from you.
>
> Gael
>
>
>
>
>
> *Dr. Gaël Goret*
>
> Chercheur Postdoctoral
>
> Département des Technologies Silicium
>
> *S*ervice de *C*aractérisation des *M*atériaux & *C*omposants
>
> Commissariat à l’énergie atomique et aux énergies alternatives
>
> MINATEC Campus *|* 17 rue des martyrs *|* F-38054 Grenoble Cedex
>
> T. +33 (0)4 38 7*8 49 29 **| *gael.goret at cea.fr
>
>
>
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