[Neuroimaging] visualize odfs on a slice with dipy fvtk

Eleftherios Garyfallidis garyfallidis at gmail.com
Thu Oct 1 20:00:02 CEST 2015


Hi John,

Yes, it is possible but the code is not yet merged in the development
branch. Have a look here

https://github.com/Garyfallidis/dipy/blob/fvtk_2.0_pr2/dipy/viz/tests/test_fvtk_actors.py#L212

Give me some feedback if you start using it. Have a look also at this
tutorial it has many goodies :)

https://github.com/Garyfallidis/dipy/blob/fvtk_2.0_pr2/doc/examples/viz_advanced.py

Happy hacking!

Cheers,
Eleftherios

On Thu, Oct 1, 2015 at 1:33 PM, John Griffiths <j.davidgriffiths at gmail.com>
wrote:

>
> Dear dipy experts,
>
> I'd like to visualize some ODFs on a slice with fvtk.
>
> Something like the example here
>
>
> http://nipy.sourceforge.net/dipy/examples_built/reconst_csd.html#example-reconst-csd
>
> ...but with additionally an FA or RGB map for the slice 'underneath' the
> ODFs.
>
>
> Is that possible?
>
>
> Ta,
>
> john
>
>
>
> --
>
> Dr. John Griffiths
>
> Post-Doctoral Research Fellow
>
> Rotman Research Institute, Baycrest
>
> Toronto, Canada
>
> and
>
> Visiting Research Fellow
>
> School of Physics
>
> University of Sydney
>
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> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
>
>
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