[Neuroimaging] Electrophysiology software in python?

Denis-Alexander Engemann denis.engemann at gmail.com
Mon Sep 14 22:30:01 CEST 2015


Hi Nate,

please take a deeper look into MNE, it's very flexible and people are even
using it for ECOG.
See the blog posts by Chris Holdgraf, for example.

http://chrisholdgraf.com/using-mne-with-custom-or-non-standardized-data-formats/

Best,
Denis

On Mon, Sep 14, 2015 at 9:10 PM, Michael Waskom <mwaskom at stanford.edu>
wrote:

> Hi Nate:
>
> I think nitime might have much of what you are looking for?
> http://nipy.org/nitime/
>
> Best,
> Michael
>
> On Mon, Sep 14, 2015 at 12:06 PM, Nate Vack <njvack at wisc.edu> wrote:
>
>> Hi all,
>>
>> Sorry if this is OT, but maybe it isn't? Anyhow: I'm looking around to
>> see if there's a decent Python package for the scoring, processing, and
>> analysis of electrophysiology (EDA, EMG, respiration, etc) data in python.
>> There's PyMNE, but it looks like that's fairly specifically geared towards
>> EEG/EMG -- is there anything that's more oriented in the "small number of
>> channels that aren't necessarily EEG-like" direction?
>>
>> There's a part of my brain that feels like it's seen something like this
>> before, but my Google-fu is proving too weak.
>>
>> Thanks,
>> -Nate
>>
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>
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