[Neuroimaging] ECAT images in NiBabel

[Christopher Markiewicz]

Hi Andrew,

ECAT is still supported, but it doesn't get exercised a lot. Could you go ahead and open an issue with the errors you see in https://github.com/nipy/nibabel/issues<https://github.com/nipy/nibabel/issues?>? We can surely fix any Python 3 related errors without much trouble.

Best,
Chris
________________________________
From: Neuroimaging <neuroimaging-bounces+markiewicz=stanford.edu at python.org> on behalf of Andrew Crabb <andrew at crabb.org>
Sent: Thursday, July 25, 2019 6:09 PM
To: neuroimaging at python.org <neuroimaging at python.org>
Subject: [Neuroimaging] ECAT images in NiBabel


Hi -

I'm new to NiBabel. I'd like to open some ECAT 7 images, but I see that while the class EcatImage exists, it is not included in all_image_classes in imageclasses.py. If I add it and try load(), I get errors that suggest ecat.py is written in Python 2 (next() is called on an iter). Grepping around for 'ecat' returns lots of 'deprecated' (coincidence, I'm sure!) and not much else.

Is ECAT still a supported image format? It's as old as the hills, but we have a PET scanner that produces it.

Thanks,
Andrew
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