[Numpy-discussion] ANN: 1.8.0b2 release.
Frédéric Bastien
nouiz at nouiz.org
Mon Sep 9 13:09:17 EDT 2013
I don't have CFLAGS defined. But I have iothers env variable that point to
other python stuff like CPATH.
But even in that case, I don't understand how other people could have
compiled methods.c. The include aren't part of the env variable, but in the
file.
Anyway, I think your PR is the good fix. I checked our PR and now I have
this new error:
gcc: numpy/core/src/multiarray/multiarraymodule.c
In file included from numpy/core/src/multiarray/multiarraymodule.c:3753:0:
build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.c:303:18:
error: ‘PyArray_Partition’ undeclared here (not in a function)
build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.c:304:18:
error: ‘PyArray_ArgPartition’ undeclared here (not in a function)
In file included from numpy/core/src/multiarray/multiarraymodule.c:3753:0:
build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.c:303:18:
error: ‘PyArray_Partition’ undeclared here (not in a function)
build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.c:304:18:
error: ‘PyArray_ArgPartition’ undeclared here (not in a function)
error: Command "gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -O2 -fPIC
-DHAVE_NPY_CONFIG_H=1 -Inumpy/core/include
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath
-Inumpy/core/src/npysort -Inumpy/core/include
-I/opt/lisa/os/epd-7.1.2/include/python2.7 -c
numpy/core/src/multiarray/multiarraymodule.c -o
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/multiarraymodule.o"
failed with exit status 1
So it seam we have the same problem with those 2 functions. They are
defined in numpy/core/src/multiarray/item_selection.c, but not in the .h
file.
thanks
Fred
On Mon, Sep 9, 2013 at 11:44 AM, Charles R Harris <charlesr.harris at gmail.com
> wrote:
>
>
>
> On Mon, Sep 9, 2013 at 9:33 AM, Frédéric Bastien <nouiz at nouiz.org> wrote:
>
>> I tried it and retried and it still fail. This is in an virtualenv
>>
>> $git show
>> commit c9b06111227f7a4ec213571f97e1b8d19b9c23f5
>> Merge: 73fbfb2 8edccea
>> Author: Charles Harris <charlesr.harris at gmail.com>
>> Date: Sun Sep 8 19:47:21 2013 -0700
>>
>> Merge pull request #3701 from cgohlke/patch-2
>>
>> ENH: add support for Python 3.4 ast.NameConstant
>>
>>
>>
>> $rm -rf build ## Fail as there is no such directory
>> $pip install . # fail with the same error
>>
>> $pip uninstall numpy
>> $python setup.py install --user # fail with the same error
>> $pip install . ## fail with the same error:
>>
>> $git grep PyArray_SelectkindConverter
>> doc/release/1.8.0-notes.rst:* PyArray_SelectkindConverter
>> numpy/core/code_generators/numpy_api.py:
>> 'PyArray_SelectkindConverter': 298,
>> numpy/core/src/multiarray/conversion_utils.c:PyArray_SelectkindConverter(PyObject
>> *obj, NPY_SELECTKIND *selectkind)
>> numpy/core/src/multiarray/methods.c:
>> PyArray_SelectkindConverter, &sortkind,
>> numpy/core/src/multiarray/methods.c:
>> PyArray_SelectkindConverter, &sortkind,
>>
>>
>> Here I don't see PyArray_SelectkindConverter in conversion_utils.h as you
>> said it is present. Witch commit do you use?
>>
>>
> It's not there, it is part of the API. I've got a PR to add it to the *.h
> file. The question is why you are the only person (so far) to have a
> problem compiling. What are your CFLAGS?
>
> Chuck
>
>> Fred
>>
>>
>>
>> On Mon, Sep 9, 2013 at 11:02 AM, Charles R Harris <
>> charlesr.harris at gmail.com> wrote:
>>
>>>
>>>
>>>
>>> On Mon, Sep 9, 2013 at 8:51 AM, Charles R Harris <
>>> charlesr.harris at gmail.com> wrote:
>>>
>>>>
>>>>
>>>>
>>>> On Mon, Sep 9, 2013 at 7:46 AM, Frédéric Bastien <nouiz at nouiz.org>wrote:
>>>>
>>>>> Hi,
>>>>>
>>>>> I checkout the dev version of numpy and it fail to compile with this
>>>>> error:
>>>>>
>>>>> creating
>>>>> build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray
>>>>>
>>>>> compile options: '-DHAVE_NPY_CONFIG_H=1 -Inumpy/core/include
>>>>> -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy
>>>>> -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
>>>>> -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath
>>>>> -Inumpy/core/src/npysort -Inumpy/core/include
>>>>> -I/opt/lisa/os/epd-7.1.2/include/python2.7 -c'
>>>>>
>>>>> gcc: numpy/core/src/multiarray/sequence.c
>>>>>
>>>>> gcc: numpy/core/src/multiarray/descriptor.c
>>>>>
>>>>> gcc: numpy/core/src/multiarray/getset.c
>>>>>
>>>>> gcc: numpy/core/src/multiarray/arrayobject.c
>>>>>
>>>>> gcc: numpy/core/src/multiarray/methods.c
>>>>>
>>>>> numpy/core/src/multiarray/methods.c: In function ‘array_partition’:
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1199:38: error:
>>>>> ‘PyArray_SelectkindConverter’ undeclared (first use in this function)
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1199:38: note: each undeclared
>>>>> identifier is reported only once for each function it appears in
>>>>>
>>>>> numpy/core/src/multiarray/methods.c: In function ‘array_argpartition’:
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1316:38: error:
>>>>> ‘PyArray_SelectkindConverter’ undeclared (first use in this function)
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1352:9: warning: assignment makes
>>>>> pointer from integer without a cast
>>>>>
>>>>> numpy/core/src/multiarray/methods.c: In function ‘array_partition’:
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1199:38: error:
>>>>> ‘PyArray_SelectkindConverter’ undeclared (first use in this function)
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1199:38: note: each undeclared
>>>>> identifier is reported only once for each function it appears in
>>>>>
>>>>> numpy/core/src/multiarray/methods.c: In function ‘array_argpartition’:
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1316:38: error:
>>>>> ‘PyArray_SelectkindConverter’ undeclared (first use in this function)
>>>>>
>>>>> numpy/core/src/multiarray/methods.c:1352:9: warning: assignment makes
>>>>> pointer from integer without a cast
>>>>>
>>>>> error: Command "gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -O2
>>>>> -fPIC -DHAVE_NPY_CONFIG_H=1 -Inumpy/core/include
>>>>> -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy
>>>>> -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
>>>>> -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath
>>>>> -Inumpy/core/src/npysort -Inumpy/core/include
>>>>> -I/opt/lisa/os/epd-7.1.2/include/python2.7 -c
>>>>> numpy/core/src/multiarray/methods.c -o
>>>>> build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/methods.o" failed
>>>>> with exit status 1
>>>>>
>>>>>
>>>>> PyArray_SelectkindConverter is defined in
>>>>> numpy/core/src/multiarray/conversion_utils.c. methods.c include
>>>>> conversion_utils.h, but there is no fct declaration of this fct in this
>>>>> file. Is that normal?
>>>>>
>>>>>
>>>> No, it looks like a bug. What is strange is that it doesn't show up on
>>>> my machine. What compiler flags are you using?
>>>>
>>>> Could you make a PR for this?
>>>>
>>>> <snip>
>>>>
>>>>
>>> Wait a minute, it is in the API. Try a clean build and see what happens.
>>>
>>> Chuck
>>>
>>>>
>>>>
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>>>
>>
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