[SciPy-Dev] ENH: Extend peak finding capabilities in scipy.signal (#8264)

Eric Larson larson.eric.d at gmail.com
Wed Feb 14 07:25:26 EST 2018


Thanks for working on this. That sounds like a good plan to me. I should be
able to review this week.

Eric

On Feb 14, 2018 7:11 AM, "Lars G." <lagru at mailbox.org> wrote:

> On 26.01.2018 20:49, Lars G. wrote:
> > Dear SciPy devs,
> >
> > I'd like to highlight my current pull request which extends SciPy's peak
> > finding capabilities in the signal module.
> > https://github.com/scipy/scipy/pull/8264
> > I've tried to address all feedback that was given (until now) in said
> > PR.
> > [...]
>
> I am quite confident with the current state and would encourage a last
> review. So feel free to chime in if you have some tweaks or refactoring
> to suggest.
>
> The only outstanding question is about the name of `find_peaks`. As the
> discussion on this hasn't really yielded an agreed upon solution I'm
> going to leave the name as it is for the time being.
>
> Going forward I'd like to build on this with new PRs:
>
> - Some parts (especially inside the big loops in `peak_prominences` and
> `peak_widths`) would profit from one or two private functions written in
> Cython. I get noticeable speed ups if I just replace a few steps of the
> algorithms with Cython. `find_peaks` would profit from this as well. I
> think this is worthwhile because prominence is a very useful parameter
> and it shouldn't be to much work (unit tests and PYX file already exist).
>
> - A tutorial that shows some more complicated use cases for the new
> functions and peak finding in general. If I feel confident, I may even
> give some examples and guidelines for `find_peaks_cwt` whose
> documentation was described as confusing in the past.
>
> Best regards,
> Lars
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