my fast watershed has pass all the test_watershed check
Hi Everyone:I had implemented a watershed by numba, and now it has pass all the test_watershed check and got a exactly same result with skimage, support watershed-line, support connectivity, (pass test 0-12, but mine did not support compact yet) It support nd, now only support uint8 image with uint16 marks. (because I think sometimes it is enough, It can process float image if it is needed) And it is very smart and fast. less than 100 lines, and faster than skimage one. a 3d image which skimage run more than 10 minutes ( and I cannot wait any longer, so kill it), but my watershed just need 28 s. The code are attached. BestYXDragon
Hi, Does this script run under python 2.7 and 3.6? Jaime On Wed, Nov 29, 2017 at 2:03 PM, <imagepy@sina.com> wrote:
Hi Everyone: I had implemented a watershed by numba, and now it has pass all the test_watershed check and got a exactly same result with skimage, support watershed-line, support connectivity, (pass test 0-12, but mine did not support compact yet)
It support nd, now only support uint8 image with uint16 marks. (because I think sometimes it is enough, It can process float image if it is needed)
And it is very smart and fast. less than 100 lines, and faster than skimage one. a 3d image which skimage run more than 10 minutes ( and I cannot wait any longer, so kill it), but my watershed just need 28 s.
The code are attached.
Best YXDragon
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-- *Jaime Lopez Carvajal*
Hi YXDragon, The majority of tests, except 1,3,9,11, generates this error: Connectivity dimension must be same as image Do you think, I have an older version of skimage? or could it be another thing? Jaime On Wed, Nov 29, 2017 at 2:03 PM, <imagepy@sina.com> wrote:
Hi Everyone: I had implemented a watershed by numba, and now it has pass all the test_watershed check and got a exactly same result with skimage, support watershed-line, support connectivity, (pass test 0-12, but mine did not support compact yet)
It support nd, now only support uint8 image with uint16 marks. (because I think sometimes it is enough, It can process float image if it is needed)
And it is very smart and fast. less than 100 lines, and faster than skimage one. a 3d image which skimage run more than 10 minutes ( and I cannot wait any longer, so kill it), but my watershed just need 28 s.
The code are attached.
Best YXDragon
_______________________________________________ scikit-image mailing list scikit-image@python.org https://mail.python.org/mailman/listinfo/scikit-image
-- *Jaime Lopez Carvajal*
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