I have correctly installed and tested SfePy on my desktop. I am
having issues on my laptop. Both are running Ubuntu Gutsy. I think I
followed the same procedure on both. make finishes on both machines
without errors. Here is the output of trying to run "python simple.py
input/poisson.py":
ryan@ryan-duo-laptop:~/siue/Research/SfePy_build/sfepy-
release-00.41.03$ python simple.py input/poisson.py
sfe: warning: other missing: ['functions', 'modules', 'epbc_[0-9]+|
epbcs', 'lcbc_[0-9]+|lcbcs', 'nbc_[0-9]+|nbcs']
sfe: reading mesh...
sfe: ...done in 0.03 s
sfe: setting up domain edges...
sfe: ...done in 0.02 s
sfe: setting up domain faces...
sfe: ...done in 0.01 s
sfe: creating regions...
sfe: leaf Gamma_Right region_4
sfe: leaf Omega region_1000
sfe: leaf Gamma_Left region_03
sfe: ...done in 0.04 s
sfe: equation "Temperature":
sfe: dw_laplace.i1.Omega( coef.val, s, t ) = 0
Traceback (most recent call last):
File "simple.py", line 106, in <module>
main()
File "simple.py", line 98, in main
dpb, vecDP, data = solveDirect( conf, options )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/solvers/generic.py", line 155, in solveDirect
pb, state, data = solveStationary( conf, saveNames = saveNames )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/solvers/generic.py", line 55, in solveStationary
problem = ProblemDefinition.fromConf( conf )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/problemDef.py", line 67, in fromConf
obj.setEquations( conf.equations )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/problemDef.py", line 133, in setEquations
equations.parseTerms( self.domain.regions )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/equations.py", line 147, in parseTerms
eq.parseTerms( regions, self.caches )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/equations.py", line 230, in parseTerms
terms = parseTerms( regions, self.desc, self.itps )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/equations.py", line 26, in parseTerms
bnf = createBNF( termDescs, itps )
File "/home/ryan/siue/Research/SfePy_build/sfepy-release-00.41.03/
sfe/fem/parseEq.py", line 79, in createBNF
default = [] )( "args" ) + ")"
TypeError: 'Optional' object is not callable
So, it seems like something is missing, but I don't know what
sfe: warning: other missing: ['functions', 'modules', 'epbc_[0-9]+|
epbcs', 'lcbc_[0-9]+|lcbcs', 'nbc_[0-9]+|nbcs']
means.
Here is the output of "python runTests.py":
ryan@ryan-duo-laptop:~/siue/Research/SfePy_build/sfepy-
release-00.41.03$ python runTests.py
<<< directory: tests, test files: 18
tests/test_input_kostka.py
--- test_input: failed!
tests/test_input_octahedron.py
nodes: 100% |
###################################################| Time: 00:00:00
elements: 100% |
################################################| Time: 00:00:01
--- test_input: failed!
tests/test_input_navier_stokes.py
--- test_input: failed!
tests/test_input_poisson.py
--- test_input: failed!
tests/test_elasticity_small_strain.py
--- test_get_solution: failed!
+++ test_linear_terms: ok
tests/test_quadratures.py
--- test_problemCreation: failed!
tests/test_io.py
+++ test_recursiveDictHDF5: ok
--- test_sparseMatrixHDF5: failed!
tests/test_parsing.py
--- test_parseEquations: failed!
+++ test_parseRegions: ok
tests/test_periodic_bc_3d.py
+++ test_pbc: ok
tests/test_input_pfdpm_permeability.py
--- test_input: failed!
tests/test_lcbc_2d.py
--- test_linearRigidBodyBC: failed!
tests/test_periodic_bc_2d.py
+++ test_pbc: ok
tests/test_input_le.py
--- test_input: failed!
tests/test_input_time_poisson.py
--- test_input: failed!
tests/test_base.py
+++ test_structAdd: ok
+++ test_structIAdd: ok
tests/test_lcbc_3d.py
--- test_linearRigidBodyBC: failed!
tests/test_input_sinbc.py
--- test_input: failed!
tests/test_meshio.py
nodes: 100% |
###################################################| Time: 00:00:00
elements: 100% |
################################################| Time: 00:00:01
+++ test_readMeshes: ok
+++ test_compareSameMeshes: ok
18 test file(s) executed in 7.65 s, 14 failure(s) of 23 test(s)
What do I need to do to get this fixed?
Thanks,
Ryan
